RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PCDHA4Q9UN74 947 aa14.35□□□□□ -0.11
VEGFA-225ENST00000523950 UBIAD1Q9Y5Z9 338 aa14.35□□□□□ -0.11
VEGFA-225ENST00000523950 MROH7Q68CQ1 1323 aa14.35□□□□□ -0.11
VEGFA-225ENST00000523950 PPFIA3O75145 1194 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 BEX3Q00994 111 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 LY6KQ17RY6 165 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 LRRC26Q2I0M4 334 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 CELF3Q5SZQ8 465 aaKnown RBP14.34□□□□□ -0.11
VEGFA-225ENST00000523950 DHX37Q8IY37 1157 aaKnown RBP14.34□□□□□ -0.11
VEGFA-225ENST00000523950 PPTC7Q8NI37 304 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 COPS5Q92905 334 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 FERMT2Q96AC1 680 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 JADE2Q9NQC1 790 aa14.34□□□□□ -0.11
VEGFA-225ENST00000523950 A0A0U1RQG5 324 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 GGPS1O95749 300 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 MMP3P08254 477 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 CYP3A4P08684 503 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 UBA1P22314 1058 aaKnown RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 ATN1P54259 1190 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 RTP1P59025 263 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 HMGN5P82970 282 aaKnown RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 ARHGAP4P98171 946 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 PURAQ00577 322 aaKnown RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 MTMR1Q13613 665 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 PRPF38BQ5VTL8 546 aaKnown RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 JAKMIP3Q5VZ66 844 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 NIPA1Q7RTP0 329 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 BLIDQ8IZY5 108 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 CRYGNQ8WXF5 182 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 MXRA8Q9BRK3 442 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 MTG1Q9BT17 334 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-225ENST00000523950 TMEM260Q9NX78 707 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 RTEL1Q9NZ71 1219 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 SCN10AQ9Y5Y9 1956 aa14.33□□□□□ -0.12
VEGFA-225ENST00000523950 FDPSP14324 419 aaKnown RBP14.32□□□□□ -0.12
VEGFA-225ENST00000523950 ITGB5P18084 799 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 PTGS1P23219 599 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 ST3GAL1Q11201 340 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 DGKDQ16760 1214 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 CEP55Q53EZ4 464 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 METTL7BQ6UX53 244 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 CXCL17Q6UXB2 119 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 AFG1LQ8WV93 481 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 AIFM3Q96NN9 605 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 MLXIPQ9HAP2 919 aa14.32□□□□□ -0.12
VEGFA-225ENST00000523950 MKI67P46013 3256 aaKnown RBP14.32□□□□□ -0.12
VEGFA-225ENST00000523950 PDE4DIPQ5VU43 2346 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 M0R2N6 131 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 ARVCFO00192 962 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 MYL3P08590 195 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 HOXD8P13378 290 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-225ENST00000523950 CIITAP33076 1130 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 ZNF76P36508 570 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 CDK7P50613 346 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 SETQ01105 290 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-225ENST00000523950 SP2Q02086 613 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 TRIM60Q495X7 471 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 ANKRD33Q7Z3H0 272 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 KRT25Q7Z3Z0 450 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 C7orf61Q8IZ16 206 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 SLC43A3Q8NBI5 491 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-225ENST00000523950 SPATA33Q96N06 139 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 KATNAL1Q9BW62 490 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
VEGFA-225ENST00000523950 TNRC18O15417 2968 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-225ENST00000523950 DOCK5Q9H7D0 1870 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 MEIS1O00470 390 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 JAK2O60674 1132 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 PPFIA4O75335 1185 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 KCNA2P16389 499 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 USP11P51784 963 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 PTPN11Q06124 597 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-225ENST00000523950 ITGA7Q13683 1181 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 TRIM29Q14134 588 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 NPY5RQ15761 445 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 ATP11BQ9Y2G3 1177 aa14.3□□□□□ -0.12
VEGFA-225ENST00000523950 DCDC2CA8MYV0 355 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 NOP56O00567 594 aaKnown RBP14.29□□□□□ -0.12
VEGFA-225ENST00000523950 TLR3O15455 904 aaKnown RBP14.29□□□□□ -0.12
VEGFA-225ENST00000523950 F2P00734 622 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 HSDL1Q3SXM5 330 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 NFRKBQ6P4R8 1299 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 MOXD1Q6UVY6 613 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 SDF4Q9BRK5 362 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 KCNH7Q9NS40 1196 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 PRKAG2Q9UGJ0 569 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 KCNJ14Q9UNX9 436 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 KIF3AQ9Y496 699 aa14.29□□□□□ -0.12
VEGFA-225ENST00000523950 NFASCO94856 1347 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms