RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 DCDC2CA8MYV0 355 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 CABYRO75952 493 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 SLC34A2O95436 690 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 GGPS1O95749 300 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 ZNF286BP0CG31 522 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 RAG1P15918 1043 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 CLK2P49760 499 aaKnown RBP10.94□□□□□ -0.66
PABPC1-222ENST00000523555 CHMP4BP1P59074 171 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 STK3Q13188 491 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 SHHQ15465 462 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 PFKFB3Q16875 520 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-222ENST00000523555 C8orf34Q49A92 452 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 CELF3Q5SZQ8 465 aaKnown RBP10.94□□□□□ -0.66
PABPC1-222ENST00000523555 PCNX4Q63HM2 1172 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 CUL5Q93034 780 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 EMID1Q96A84 441 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-222ENST00000523555 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-222ENST00000523555 MTG1Q9BT17 334 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-222ENST00000523555 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-222ENST00000523555 RIC8AQ9NPQ8 531 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 PDRG1Q9NUG6 133 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 PTPRSQ13332 1948 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 KAT6AQ92794 2004 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 SMCO2A6NFE2 343 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 SPATA31C2B4DYI2 1134 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 ATP9AO75110 1047 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 LARGE1O95461 756 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 TIMP1P01033 207 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 CYP2C9P11712 490 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 SCG2P13521 617 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 ITGB5P18084 799 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 ICAM3P32942 547 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 CYP2C18P33260 490 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 HIC1Q14526 733 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 DHX37Q8IY37 1157 aaKnown RBP10.93□□□□□ -0.66
PABPC1-222ENST00000523555 PPTC7Q8NI37 304 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 CYP2W1Q8TAV3 490 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 VWCEQ96DN2 955 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 CTAGE1Q96RT6 745 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 SLC26A6Q9BXS9 759 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 WNT8AQ9H1J5 351 aa10.93□□□□□ -0.66
PABPC1-222ENST00000523555 TLR3O15455 904 aaKnown RBP10.92□□□□□ -0.66
PABPC1-222ENST00000523555 PRPF3O43395 683 aaKnown RBP10.92□□□□□ -0.66
PABPC1-222ENST00000523555 HOXD8P13378 290 aaPredicted RBP10.92□□□□□ -0.66
PABPC1-222ENST00000523555 IFNAR1P17181 557 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 ADCY7P51828 1080 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 SCRN1Q12765 414 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 FAM47CQ5HY64 1035 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 GDF6Q6KF10 455 aaPredicted RBP10.92□□□□□ -0.66
PABPC1-222ENST00000523555 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 C16orf59Q7L2K0 433 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 CYFIP1Q7L576 1253 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 RASGRP4Q8TDF6 673 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 IL17RAQ96F46 866 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 SPATA33Q96N06 139 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 AIFM3Q96NN9 605 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 NOC4LQ9BVI4 516 aaKnown RBP10.92□□□□□ -0.66
PABPC1-222ENST00000523555 ANO3Q9BYT9 981 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 VPS54Q9P1Q0 977 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 TPCN1Q9ULQ1 816 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 UBIAD1Q9Y5Z9 338 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 SIP14410 1827 aa10.92□□□□□ -0.66
PABPC1-222ENST00000523555 EYSQ5T1H1 3165 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 COL6A3P12111 3177 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 CCDC196A0A1B0GTZ2 297 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 SPDYE3A6NKU9 549 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 HAS3O00219 553 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 FIBPO43427 364 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 EDIL3O43854 480 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 STAM2O75886 525 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 F2P00734 622 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 ACRP10323 421 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 TGFB3P10600 412 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 CSF2RAP15509 400 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 KCNA2P16389 499 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 PSEN2P49810 448 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 AK2P54819 239 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 CCL23P55773 120 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 ZNF200P98182 395 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-222ENST00000523555 SP4Q02446 784 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 FPGSQ05932 587 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 DGKDQ16760 1214 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 GNPTABQ3T906 1256 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 BRDTQ58F21 947 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-222ENST00000523555 JAKMIP3Q5VZ66 844 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 MFSD5Q6N075 450 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 TRIM50Q86XT4 487 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 ZNF274Q96GC6 653 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-222ENST00000523555 SCLYQ96I15 445 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
PABPC1-222ENST00000523555 C16orf70Q9BSU1 422 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 ALG1Q9BT22 464 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 RNF26Q9BY78 433 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-222ENST00000523555 HIPK3Q9H422 1215 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 MLXIPQ9HAP2 919 aa10.91□□□□□ -0.66
PABPC1-222ENST00000523555 HDAC6Q9UBN7 1215 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms