RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 TTYH1Q9H313 450 aaPredicted RBP8.43□□□□□ -1.06
SDCBP-210ENST00000522843 OGDHLQ9ULD0 1010 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 PTPRFP10586 1907 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 A0A0G2JLL6 359 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-210ENST00000522843 ANKRD18BA2A2Z9 1011 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 CXCL11O14625 94 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 CYP26A1O43174 497 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 DDX58O95786 925 aaKnown RBP8.42□□□□□ -1.06
SDCBP-210ENST00000522843 JUNBP17275 347 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-210ENST00000522843 FKBP1CQ5VVH2 108 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 PRRT2Q7Z6L0 340 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-210ENST00000522843 TSPYL6Q8N831 410 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 TMEM102Q8N9M5 508 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-210ENST00000522843 USP38Q8NB14 1042 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 ZDHHC15Q96MV8 337 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 HHIPQ96QV1 700 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 GJD2Q9UKL4 321 aa8.42□□□□□ -1.06
SDCBP-210ENST00000522843 NCOR1O75376 2440 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 ATRNL1Q5VV63 1379 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 PLIN1O60240 522 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 HMGCRP04035 888 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 ITGB5P18084 799 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 HIBADHP31937 336 aaKnown RBP8.41□□□□□ -1.06
SDCBP-210ENST00000522843 USP11P51784 963 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 HDLBPQ00341 1268 aaKnown RBP8.41□□□□□ -1.06
SDCBP-210ENST00000522843 IKBKEQ14164 716 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 EPHA10Q5JZY3 1008 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 MAP3K21Q5TCX8 1036 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 DCAF15Q66K64 600 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 HELQQ8TDG4 1101 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 BSNDQ8WZ55 320 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 TRIB2Q92519 343 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 PMEPA1Q969W9 287 aa8.41□□□□□ -1.06
SDCBP-210ENST00000522843 PHIPQ8WWQ0 1821 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 MTMR3Q13615 1198 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 COL19A1Q14993 1142 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 EXOSC6Q5RKV6 272 aaKnown RBP8.4□□□□□ -1.06
SDCBP-210ENST00000522843 PHLDB3Q6NSJ2 640 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 ZFPM1Q8IX07 1006 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 ANKRD13CQ8N6S4 541 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 GTF3C2Q8WUA4 911 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-210ENST00000522843 FBLIM1Q8WUP2 373 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 TEKT1Q969V4 418 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 NXPE3Q969Y0 559 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 USP26Q9BXU7 913 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-210ENST00000522843 SLC45A1Q9Y2W3 748 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 AFG3L2Q9Y4W6 797 aa8.4□□□□□ -1.06
SDCBP-210ENST00000522843 LTBP2Q14767 1821 aa8.4□□□□□ -1.07
SDCBP-210ENST00000522843 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.07
SDCBP-210ENST00000522843 BDP1A6H8Y1 2624 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 DRD2P14416 443 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 ADMP35318 185 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 NEXNQ0ZGT2 675 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 CHAF1AQ13111 956 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-210ENST00000522843 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
SDCBP-210ENST00000522843 C9orf50Q5SZB4 431 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 TREML2Q5T2D2 321 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 CCDC30Q5VVM6 783 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 GADL1Q6ZQY3 521 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 VN1R5Q7Z5H4 357 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 FBXO33Q7Z6M2 555 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 CCDC84Q86UT8 332 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-210ENST00000522843 FAM151AQ8WW52 585 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 COA7Q96BR5 231 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 RUNDC1Q96C34 613 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 FAM122AQ96E09 287 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 TBC1D32Q96NH3 1257 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 MRIQ9BWK5 157 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 PUS3Q9BZE2 481 aaKnown RBP8.39□□□□□ -1.07
SDCBP-210ENST00000522843 IFT57Q9NWB7 429 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 ZHX2Q9Y6X8 837 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 AK9Q5TCS8 1911 aa8.39□□□□□ -1.07
SDCBP-210ENST00000522843 DLGAP3O95886 979 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 FOSL2P15408 326 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 MPSTP25325 297 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 TCP10Q12799 353 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 UBE4AQ14139 1066 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 SHHQ15465 462 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 FAM110CQ1W6H9 321 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 LMBR1LQ6UX01 489 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 FASTKD5Q7L8L6 764 aaKnown RBP8.38□□□□□ -1.07
SDCBP-210ENST00000522843 ZAR1Q86SH2 424 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 SCYL3Q8IZE3 742 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 AGBL5Q8NDL9 886 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 EDEM1Q92611 657 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 OSMRQ99650 979 aa8.38□□□□□ -1.07
SDCBP-210ENST00000522843 SOX17Q9H6I2 414 aaPredicted RBP8.38□□□□□ -1.07
SDCBP-210ENST00000522843 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 PEX10O60683 326 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 PCSK2P16519 638 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 DNM1Q05193 864 aaKnown RBP8.37□□□□□ -1.07
SDCBP-210ENST00000522843 MAP3K12Q12852 859 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 CDC42EP5Q6NZY7 148 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 HHIPL2Q6UWX4 724 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 LDHAL6AQ6ZMR3 332 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 TTC16Q8NEE8 873 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms