RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 TNMDQ9H2S6 317 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.69
SHPRH-209ENST00000521977 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 RBPJLQ9UBG7 517 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 FBXO40Q9UH90 709 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
SHPRH-209ENST00000521977 CCL15-CCL14A0A0B4J2E2 113 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 ACTN4O43707 911 aaKnown RBP10.76□□□□□ -0.69
SHPRH-209ENST00000521977 SLC25A27O95847 323 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 BCRP11274 1271 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 COPB2P35606 906 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 BAATQ14032 418 aaPredicted RBP10.76□□□□□ -0.69
SHPRH-209ENST00000521977 E2F4Q16254 413 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 CAMK4Q16566 473 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 CCL15Q16663 113 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 LONRF3Q496Y0 759 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 PPP1R15BQ5SWA1 713 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 PCNX4Q63HM2 1172 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 NSMFQ6X4W1 530 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 KRBA2Q6ZNG9 492 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 NIPA1Q7RTP0 329 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 SLFN12Q8IYM2 578 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 SMC1BQ8NDV3 1235 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 FAM20AQ96MK3 541 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 TAAR1Q96RJ0 339 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 PYM1Q9BRP8 204 aaKnown RBP10.76□□□□□ -0.69
SHPRH-209ENST00000521977 MOV10L1Q9BXT6 1211 aaKnown RBP10.76□□□□□ -0.69
SHPRH-209ENST00000521977 TXNRD2Q9NNW7 524 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 PXMP2Q9NR77 195 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 USP25Q9UHP3 1055 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 TLL2Q9Y6L7 1015 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 LCTP09848 1927 aa10.76□□□□□ -0.69
SHPRH-209ENST00000521977 PDHXO00330 501 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 MEIS1O00470 390 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 MSH4O15457 936 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 POLR2DO15514 142 aaKnown RBP10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PEX10O60683 326 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 SLC10A3P09131 477 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 TECP42680 631 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 TXKP42681 527 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
SHPRH-209ENST00000521977 SETQ01105 290 aaPredicted RBP10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PLS1Q14651 629 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PGM5Q15124 567 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 TMEM266Q2M3C6 531 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 Q3C1V9 767 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 CEP55Q53EZ4 464 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PRR16Q569H4 304 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 RGMBQ6NW40 437 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 XRRA1Q6P2D8 792 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 SH3RF1Q7Z6J0 888 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PTPN18Q99952 460 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 MXRA8Q9BRK3 442 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PDCD2LQ9BRP1 358 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 MMTAG2Q9BU76 263 aaKnown RBP10.75□□□□□ -0.69
SHPRH-209ENST00000521977 TTC12Q9H892 705 aaPredicted RBP10.75□□□□□ -0.69
SHPRH-209ENST00000521977 SERTAD1Q9UHV2 236 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 UBIAD1Q9Y5Z9 338 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PFASO15067 1338 aa10.75□□□□□ -0.69
SHPRH-209ENST00000521977 PP2D1A8MPX8 630 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 SLC26A4O43511 780 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 SLFN14P0C7P3 912 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 ITGB5P18084 799 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 CDC25AP30304 524 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 ZNF76P36508 570 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 TXLNAP40222 546 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 ZNF157P51786 506 aaPredicted RBP10.74□□□□□ -0.69
SHPRH-209ENST00000521977 ERVK-9P63128 1117 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 ERVK-24P63145 666 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 UBXN2AP68543 259 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 MRPS9P82933 396 aaKnown RBP10.74□□□□□ -0.69
SHPRH-209ENST00000521977 SPIRE1Q08AE8 756 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 KANK3Q6NY19 840 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 CKAP2LQ8IYA6 745 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 FAM43AQ8N2R8 423 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 CNNM3Q8NE01 707 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 SHCBP1Q8NEM2 672 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 DNERQ8NFT8 737 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 IL31RAQ8NI17 732 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 CYP2W1Q8TAV3 490 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 HHIPL1Q96JK4 782 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 RMDN3Q96TC7 470 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 SDF4Q9BRK5 362 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 PAGR1Q9BTK6 254 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 RAB34Q9BZG1 259 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 ZCCHC17Q9NP64 241 aaKnown RBP10.74□□□□□ -0.69
SHPRH-209ENST00000521977 DISC1Q9NRI5 854 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 MORF4L1Q9UBU8 362 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 PCDHA12Q9UN75 941 aa10.74□□□□□ -0.69
SHPRH-209ENST00000521977 MANSC4A6NHS7 340 aaPredicted RBP10.73□□□□□ -0.69
SHPRH-209ENST00000521977 FAM155AB1AL88 458 aaPredicted RBP10.73□□□□□ -0.69
SHPRH-209ENST00000521977 TK2O00142 265 aa10.73□□□□□ -0.69
SHPRH-209ENST00000521977 PSMD10O75832 226 aa10.73□□□□□ -0.69
SHPRH-209ENST00000521977 TOMM70O94826 608 aa10.73□□□□□ -0.69
SHPRH-209ENST00000521977 CYP2C8P10632 490 aa10.73□□□□□ -0.69
SHPRH-209ENST00000521977 ERCC3P19447 782 aa10.73□□□□□ -0.69
SHPRH-209ENST00000521977 EIF2AK2P19525 551 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms