RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 UBE3BQ7Z3V4 1068 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 APBB1IPQ7Z5R6 666 aaPredicted RBP9.6□□□□□ -0.87
SHPRH-208ENST00000520752 LCA5Q86VQ0 697 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 RASSF8Q8NHQ8 419 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 TBC1D31Q96DN5 1066 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 FMNL2Q96PY5 1086 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
SHPRH-208ENST00000520752 TM6SF1Q9BZW5 370 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 EPN3Q9H201 632 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 ZFYVE1Q9HBF4 777 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
SHPRH-208ENST00000520752 CIDEBQ9UHD4 219 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 CFAP45Q9UL16 551 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 NSD2O96028 1365 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 ADCY10Q96PN6 1610 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 A0A096LPE4 126 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 A0A1W2PPZ6 126 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 CFAP73A6NFT4 308 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 LRRIQ3A6PVS8 624 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 CEP104O60308 925 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 BUB1BO60566 1050 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 HMMRO75330 724 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 GSTA1P08263 222 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 IDO1P14902 403 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 ZFXP17010 805 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 ZNF24P17028 368 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 PSMC4P43686 418 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 BAG6P46379 1132 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 NLRP5P59047 1200 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 CAMK4Q16566 473 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 SGSM1Q2NKQ1 1148 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 FOXD4L6Q3SYB3 417 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 CCDC92Q53HC0 331 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 SH2D4BQ5SQS7 431 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 THEMIS2Q5TEJ8 643 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 GDF6Q6KF10 455 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 FOXD4L3Q6VB84 417 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 CCDC83Q8IWF9 413 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 ZCRB1Q8TBF4 217 aaKnown RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 SMCR8Q8TEV9 937 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-208ENST00000520752 DHX58Q96C10 678 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 PNKPQ96T60 521 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 CENPHQ9H3R5 247 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 PLEKHA4Q9H4M7 779 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 TPCN1Q9ULQ1 816 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 ATP8A1Q9Y2Q0 1164 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 KIAA1210Q9ULL0 1709 aa9.59□□□□□ -0.87
SHPRH-208ENST00000520752 UBN2Q6ZU65 1347 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-208ENST00000520752 HMGXB3Q12766 1538 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 LRRD1A4D1F6 860 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 METTL12A8MUP2 240 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 KIF5CO60282 957 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 PFKFB2O60825 505 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 GNAT1P11488 350 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 NID1P14543 1247 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 PAX3P23760 479 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 RPL13P26373 211 aaKnown RBP9.58□□□□□ -0.88
SHPRH-208ENST00000520752 CDC27P30260 824 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 GSTT1P30711 240 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 VSNL1P62760 191 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 MRPS35P82673 323 aaKnown RBP9.58□□□□□ -0.88
SHPRH-208ENST00000520752 SEPT2Q15019 361 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 POSTNQ15063 836 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 SPRED3Q2MJR0 410 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 TSNAXIP1Q2TAA8 658 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 LINC00114Q6XXX2 140 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 FAM228AQ86W67 206 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 SMYD1Q8NB12 490 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 NSMCE1Q8WV22 266 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 MRRFQ96E11 262 aaKnown RBP9.58□□□□□ -0.88
SHPRH-208ENST00000520752 TRAPPC9Q96Q05 1148 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 RUFY1Q96T51 708 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 ARPC5LQ9BPX5 153 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 NAA15Q9BXJ9 866 aaKnown RBP9.58□□□□□ -0.88
SHPRH-208ENST00000520752 XPO4Q9C0E2 1151 aaKnown RBP9.58□□□□□ -0.88
SHPRH-208ENST00000520752 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 MUC3BQ9H195 1237 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 EPC1Q9H2F5 836 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 RRAGCQ9HB90 399 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 TMOD4Q9NZQ9 345 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 SPATA7Q9P0W8 599 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 KIAA1522Q9P206 1035 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-208ENST00000520752 ATXN10Q9UBB4 475 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 CTNNAL1Q9UBT7 734 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 SOX13Q9UN79 622 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 TUBGCP6Q96RT7 1819 aa9.58□□□□□ -0.88
SHPRH-208ENST00000520752 DUOX2Q9NRD8 1548 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 ABCA9Q8IUA7 1624 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 GOLGA6L10A0A0M3HER8 536 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 TMEM232C9JQI7 657 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 F8VZ95 297 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 VIL1P09327 827 aaKnown RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 CCDC166P0CW27 439 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 VDRP11473 427 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 GJB2P29033 226 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 ALDH3A1P30838 453 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 KIF5BP33176 963 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms