RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 ZFYVE27Q5T4F4 411 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 YOD1Q5VVQ6 348 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 FOXB2Q5VYV0 432 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 CCDC103Q8IW40 242 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 SH3TC2Q8TF17 1288 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 ZNF526Q8TF50 670 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 CPA5Q8WXQ8 436 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 RNPC3Q96LT9 517 aaKnown RBP4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 NOX5Q96PH1 765 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 IER2Q9BTL4 223 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 MARCH2Q9P0N8 246 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 TMEFF2Q9UIK5 374 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 NUDT5Q9UKK9 219 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 FAN1Q9Y2M0 1017 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 MRPL42Q9Y6G3 142 aaKnown RBP4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 TLDC2A0PJX2 215 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 PRODHO43272 600 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 DLX3O60479 287 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 SNRPB2P08579 225 aaKnown RBP4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 CACNB2Q08289 660 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 SLC9A5Q14940 896 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 PRSS53Q2L4Q9 553 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 NLRP10Q86W26 655 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 TMEM145Q8NBT3 493 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 SMARCC2Q8TAQ2 1214 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 OSBP2Q969R2 916 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 EXOC2Q96KP1 924 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
TRAPPC13-212ENST00000520525 ESYT3A0FGR9 886 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 ZBTB7AO95365 584 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 CPP00450 1065 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 C8BP07358 591 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 PABPC1P11940 636 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 ECI1P42126 302 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 KCNJ6P48051 423 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 MAP4K2Q12851 820 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 SQSTM1Q13501 440 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 ZC3H12BQ5HYM0 836 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 FAM209AQ5JX71 171 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 NSMFQ6X4W1 530 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 TEX2Q8IWB9 1127 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 Q8N1Y9 231 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 KREMEN2Q8NCW0 462 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 ZSWIM2Q8NEG5 633 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 USP33Q8TEY7 942 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 C1orf159Q96HA4 380 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 CDC6Q99741 560 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 SPATA25Q9BR10 227 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 TMEM260Q9NX78 707 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 FBXL7Q9UJT9 491 aa4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 CNOT11Q9UKZ1 510 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 TMA7Q9Y2S6 64 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-212ENST00000520525 TRBV23-1A0A0A0MS06 115 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 C22orf46C9J442 243 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 SGSM2O43147 1006 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 FPR2P25090 351 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 KCNC1P48547 511 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 ZXDAP98168 799 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 TESK1Q15569 626 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 SLC35F1Q5T1Q4 408 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 E4F1Q66K89 784 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 DENND5AQ6IQ26 1287 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 DCP2Q8IU60 420 aaKnown RBP4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 SCUBE1Q8IWY4 988 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 KCTD13Q8WZ19 329 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 KISS1RQ969F8 398 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 SYT3Q9BQG1 590 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 DHRS4Q9BTZ2 278 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 SPATA6Q9NWH7 488 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 BTG4Q9NY30 223 aa4.74□□□□□ -1.65
TRAPPC13-212ENST00000520525 CCDC163A0A0D9SF12 145 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 K7ESM1 405 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 SUMO1P63165 101 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 ACBD5Q5T8D3 534 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 SDE2Q6IQ49 451 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 MIB1Q86YT6 1006 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 RIOX2Q8IUF8 465 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 PPIL6Q8IXY8 311 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 CARFQ8N187 725 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 LINC00482Q8N8I6 264 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 DDX11Q96FC9 970 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 IPO9Q96P70 1041 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 GORASP1Q9BQQ3 440 aa4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 MRPS23Q9Y3D9 190 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-212ENST00000520525 ENPP3O14638 875 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 MEFVO15553 781 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 SMARCA5O60264 1052 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 BCL6P41182 706 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 SLC6A11P48066 632 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 RPL11P62913 178 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 RBM10P98175 930 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 KCNAB2Q13303 367 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 NTRK3Q16288 839 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 NT5DC1Q5TFE4 455 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 IQCEQ6IPM2 695 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 ETV3LQ6ZN32 361 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 HOMER1Q86YM7 354 aa4.72□□□□□ -1.65
TRAPPC13-212ENST00000520525 FAM26EQ8N5C1 309 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms