RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 CYP21A2P08686 494 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 DMP1Q13316 513 aaPredicted RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 DESI2Q9BSY9 194 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 STAM2O75886 525 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 BLVRAP53004 296 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 POLA2Q14181 598 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 APOA5Q6Q788 366 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 METTL13Q8N6R0 699 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 HDAC11Q96DB2 347 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 PAGR1Q9BTK6 254 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 TSC22D4Q9Y3Q8 395 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ERVV-1B6SEH8 477 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 hCG_1984214I3L0E3 225 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 SH2B2O14492 632 aaPredicted RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 HGSO14964 777 aaPredicted RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ADAM9Q13443 819 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 PALM2Q8IXS6 379 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ST13P4Q8IZP2 240 aaPredicted RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ABCC12Q96J65 1359 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 TRIM37O94972 964 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 BAG2O95816 211 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 CASP2P42575 452 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 MMEL1Q495T6 779 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 FAM178BQ8IXR5 827 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 C1orf112Q9NSG2 853 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 GNGT2O14610 69 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 KCNK3O14649 394 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 BUB1O43683 1085 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 TTLL1O95922 423 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 ABCB4P21439 1286 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 GARSP41250 739 aaKnown RBP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 FGD4Q96M96 766 aa13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
ERGIC1-208ENST00000520399 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 SORBS3O60504 671 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 CAND2O75155 1236 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 TPP2P29144 1249 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 GADL1Q6ZQY3 521 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 PDZD4Q76G19 769 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 EVI5O60447 810 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 HSPA8P11142 646 aaKnown RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 TRIM60Q495X7 471 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 RSAD2Q8WXG1 361 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 CCDC17Q96LX7 622 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 AK8Q96MA6 479 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 TRIM66O15016 1216 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 SLC44A4Q53GD3 710 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 GPATCH4Q5T3I0 446 aaKnown RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 CNOT6LQ96LI5 555 aaKnown RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 E9PMD0 336 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 ITKQ08881 620 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 RAB44Q7Z6P3 723 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 LCORLQ8N3X6 602 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 KRT12Q99456 494 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 ANGPTL3Q9Y5C1 460 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 KRIT1O00522 736 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 TSTA3Q13630 321 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 KRT81Q14533 505 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 FAM160B1Q5W0V3 765 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 C4orf50Q6ZRC1 276 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 TRIM50Q86XT4 487 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 SLC17A8Q8NDX2 589 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 TDRD7Q8NHU6 1098 aaKnown RBP13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
ERGIC1-208ENST00000520399 ATF7P17544 494 aaPredicted RBP13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 STX2P32856 288 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms