RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 HOXA7P31268 230 aaPredicted RBP28.62■■■□□ 2.17
COL13A1-213ENST00000520267 ZBED6P86452 979 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 SPIRE1Q08AE8 756 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 KIAA1755Q5JYT7 1200 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 MCTP2Q6DN12 878 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 NPHP3-ACAD11A0A0J9YXS1 232 aa28.61■■■□□ 2.17
COL13A1-213ENST00000520267 MYOCDQ8IZQ8 938 aa28.61■■■□□ 2.17
COL13A1-213ENST00000520267 LENG9Q96B70 501 aa28.61■■■□□ 2.17
COL13A1-213ENST00000520267 FGFBP2Q9BYJ0 223 aa28.61■■■□□ 2.17
COL13A1-213ENST00000520267 EPC1Q9H2F5 836 aa28.61■■■□□ 2.17
COL13A1-213ENST00000520267 NDST4Q9H3R1 872 aa28.61■■■□□ 2.17
COL13A1-213ENST00000520267 ZNF70Q9UC06 446 aaPredicted RBP28.61■■■□□ 2.17
COL13A1-213ENST00000520267 SPDYE3A6NKU9 549 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 PSMD14O00487 310 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 FGFR1OPO95684 399 aaKnown RBP28.6■■■□□ 2.17
COL13A1-213ENST00000520267 HOXA13P31271 388 aaPredicted RBP28.6■■■□□ 2.17
COL13A1-213ENST00000520267 SREBF1P36956 1147 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 CLCN6P51797 869 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 CACNB1Q02641 598 aaPredicted RBP28.6■■■□□ 2.17
COL13A1-213ENST00000520267 Q4G0T1 1027 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 FAM26FQ5R3K3 315 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 RSRC2Q7L4I2 434 aaKnown RBP28.6■■■□□ 2.17
COL13A1-213ENST00000520267 ACER1Q8TDN7 264 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 PKNOX2Q96KN3 472 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 BMP2KQ9NSY1 1161 aaPredicted RBP28.6■■■□□ 2.17
COL13A1-213ENST00000520267 TRIM10Q9UDY6 481 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 FAM86B1E9PN63 330 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 FAM86B2P0C5J1 330 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 HERVK_113P62684 666 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 FIGNQ5HY92 759 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 GPBP1Q86WP2 473 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 TBC1D7Q9P0N9 293 aa28.6■■■□□ 2.17
COL13A1-213ENST00000520267 FOSP01100 380 aaPredicted RBP28.59■■■□□ 2.17
COL13A1-213ENST00000520267 MAN2A1Q16706 1144 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 GMLQ99445 158 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 TSG101Q99816 390 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 COL4A5P29400 1685 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 A0A1W2PQJ5 194 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 CTAGE9A4FU28 777 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 POTEFA5A3E0 1075 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 SLC26A4O43511 780 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 POTEIP0CG38 1075 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 CYP11B2P19099 503 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 KIF4BQ2VIQ3 1234 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 POTEGQ6S5H5 508 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 POTEEQ6S8J3 1075 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 FAM151AQ8WW52 585 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 SIK3Q9Y2K2 1263 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 ZBTB12Q9Y330 459 aaPredicted RBP28.59■■■□□ 2.17
COL13A1-213ENST00000520267 PCDHA2Q9Y5H9 948 aa28.59■■■□□ 2.17
COL13A1-213ENST00000520267 ABCB11O95342 1321 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 VIL1P09327 827 aaKnown RBP28.58■■■□□ 2.17
COL13A1-213ENST00000520267 DLGAP5Q15398 846 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 ZCWPW2Q504Y3 356 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 TEX35Q5T0J7 233 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 TTLL6Q8N841 843 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 MYO1AQ9UBC5 1043 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 CDC23Q9UJX2 597 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 CNTNAP1P78357 1384 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 TBX3O15119 743 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 NCAPH2Q6IBW4 605 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 CATSPER3Q86XQ3 398 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 CCDC65Q8IXS2 484 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 ARHGEF10LQ9HCE6 1279 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 ZNF277Q9NRM2 450 aaPredicted RBP28.58■■■□□ 2.17
COL13A1-213ENST00000520267 ZNHIT6Q9NWK9 470 aaKnown RBP28.58■■■□□ 2.17
COL13A1-213ENST00000520267 SYNPO2Q9UMS6 1093 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 TFR2Q9UP52 801 aa28.58■■■□□ 2.17
COL13A1-213ENST00000520267 ERCC3P19447 782 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 SLC12A3P55017 1021 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 RAD51AP2Q09MP3 1159 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 FOXR2Q6PJQ5 311 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 LARGE2Q8N3Y3 721 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 GUCA1BQ9UMX6 200 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 ARSHQ5FYA8 562 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 NAPGQ99747 312 aaPredicted RBP28.57■■■□□ 2.16
COL13A1-213ENST00000520267 NHEJ1Q9H9Q4 299 aaPredicted RBP28.57■■■□□ 2.16
COL13A1-213ENST00000520267 TMX2Q9Y320 296 aa28.57■■■□□ 2.16
COL13A1-213ENST00000520267 EPHB6O15197 1021 aa28.56■■■□□ 2.16
COL13A1-213ENST00000520267 STAT2P52630 851 aa28.56■■■□□ 2.16
COL13A1-213ENST00000520267 HAUS3Q68CZ6 603 aa28.56■■■□□ 2.16
COL13A1-213ENST00000520267 RTKN2Q8IZC4 609 aa28.56■■■□□ 2.16
COL13A1-213ENST00000520267 CIITAP33076 1130 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 PSMC6P62333 389 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 FAM83BQ5T0W9 1011 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 CYP2W1Q8TAV3 490 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 PSMD1Q99460 953 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 HDAC9Q9UKV0 1011 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 MSH4O15457 936 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 SPATA31C1P0DKV0 1188 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 HERC4Q5GLZ8 1057 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-213ENST00000520267 CDAN1Q8IWY9 1227 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 HAUS4Q9H6D7 363 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 ZSWIM4Q9H7M6 989 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 ZBTB21Q9ULJ3 1066 aa28.55■■■□□ 2.16
COL13A1-213ENST00000520267 MEIS1O00470 390 aa28.54■■■□□ 2.16
COL13A1-213ENST00000520267 CYLC1P35663 651 aaPredicted RBP28.54■■■□□ 2.16
COL13A1-213ENST00000520267 SRGAP1Q7Z6B7 1085 aa28.54■■■□□ 2.16
COL13A1-213ENST00000520267 NELFCDQ8IXH7 590 aa28.54■■■□□ 2.16
COL13A1-213ENST00000520267 GOLGA1Q92805 767 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms