RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 ZFPM1Q8IX07 1006 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 EXOC8Q8IYI6 725 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 Q8N1X5 172 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 PLEKHO2Q8TD55 490 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 KLHL6Q8WZ60 621 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 COPS5Q92905 334 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 TRMT2BQ96GJ1 504 aaKnown RBP3.6□□□□□ -1.83
PABPC1-211ENST00000519596 TINF2Q9BSI4 451 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 GPRC5CQ9NQ84 441 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 CYP26B1Q9NR63 512 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 LRP2BPQ9P2M1 347 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 INVSQ9Y283 1065 aa3.6□□□□□ -1.83
PABPC1-211ENST00000519596 TIMM13Q9Y5L4 95 aaPredicted RBP3.6□□□□□ -1.83
PABPC1-211ENST00000519596 ZNF20P17024 532 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 ETFBP38117 255 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 SLC6A11P48066 632 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 IRX6P78412 446 aaPredicted RBP3.59□□□□□ -1.83
PABPC1-211ENST00000519596 TBC1D10BQ4KMP7 808 aaPredicted RBP3.59□□□□□ -1.83
PABPC1-211ENST00000519596 HSP90AB4PQ58FF6 505 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 E4F1Q66K89 784 aaPredicted RBP3.59□□□□□ -1.83
PABPC1-211ENST00000519596 GTF2IRD2BQ6EKJ0 949 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 CEP68Q76N32 757 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 GTF2IRD2Q86UP8 949 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 FAM126BQ8IXS8 530 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 DIO2Q92813 273 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 KISS1RQ969F8 398 aaPredicted RBP3.59□□□□□ -1.83
PABPC1-211ENST00000519596 TMEM169Q96HH4 297 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 CHAMP1Q96JM3 812 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 CCDC136Q96JN2 1154 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 C8orf49Q96NF6 230 aa3.59□□□□□ -1.83
PABPC1-211ENST00000519596 RBM15Q96T37 977 aaKnown RBP eCLIP3.59□□□□□ -1.83
PABPC1-211ENST00000519596 LOC102724159A0A0B4J2E5 919 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 C9orf118A6NHY6 69 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 HMGB1P1B2RPK0 211 aaPredicted RBP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 DDX3XO00571 662 aaKnown RBP eCLIP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 SMAD7O15105 426 aaKnown RBP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 MEFVO15553 781 aaPredicted RBP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 SGSM2O43147 1006 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 TACR2P21452 398 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 HOXC12P31275 282 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 GDF5P43026 501 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 ANAPC15P60006 121 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 KCNAB2Q13303 367 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 PWP2Q15269 919 aaKnown RBP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 SV2CQ496J9 727 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 STK32CQ86UX6 486 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 VPS37DQ86XT2 251 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 MCF2L2Q86YR7 1114 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 MIB1Q86YT6 1006 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 RIOX2Q8IUF8 465 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 TRIM59Q8IWR1 403 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 FAM26EQ8N5C1 309 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 TXNDC5Q8NBS9 432 aaKnown RBP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 DVL3Q92997 716 aaPredicted RBP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 DRC1Q96MC2 740 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 CCDC140Q96MF4 163 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 CLIC6Q96NY7 704 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 WRNIP1Q96S55 665 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 CDK5RAP1Q96SZ6 601 aaKnown RBP3.58□□□□□ -1.84
PABPC1-211ENST00000519596 C1QTNF3Q9BXJ4 246 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 NKX2-4Q9H2Z4 354 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 MYH16Q9H6N6 1097 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 L2HGDHQ9H9P8 463 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 JADE2Q9NQC1 790 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 APEX2Q9UBZ4 518 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 RIPOR2Q9Y4F9 1068 aa3.58□□□□□ -1.84
PABPC1-211ENST00000519596 HGSO14964 777 aaPredicted RBP3.57□□□□□ -1.84
PABPC1-211ENST00000519596 LAMTOR5O43504 91 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 MAFKO60675 156 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 CPP00450 1065 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 SNRPB2P08579 225 aaKnown RBP3.57□□□□□ -1.84
PABPC1-211ENST00000519596 TGM1P22735 817 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 ACVRL1P37023 503 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 ECI1P42126 302 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 KCNJ6P48051 423 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 ITGA1P56199 1179 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 USP51Q70EK9 711 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 ZNF513Q8N8E2 541 aaPredicted RBP3.57□□□□□ -1.84
PABPC1-211ENST00000519596 MICAL1Q8TDZ2 1067 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 DPF3Q92784 378 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 TOE1Q96GM8 510 aaKnown RBP3.57□□□□□ -1.84
PABPC1-211ENST00000519596 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.57□□□□□ -1.842e-8■□□□□ 9.6
PABPC1-211ENST00000519596 LGR4Q9BXB1 951 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 TMEM168Q9H0V1 697 aa3.57□□□□□ -1.84
PABPC1-211ENST00000519596 NPEPPSL1A6NEC2 478 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 CYR61O00622 381 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 DGKIO75912 1065 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 SSBP05455 408 aaKnown RBP eCLIP3.56□□□□□ -1.84
PABPC1-211ENST00000519596 FGRP09769 529 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 MCCP23508 829 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 FPR2P25090 351 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 DNAJA1P31689 397 aaKnown RBP3.56□□□□□ -1.84
PABPC1-211ENST00000519596 BCL6P41182 706 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 STAT5AP42229 794 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 ARID5AQ03989 594 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 LSAMPQ13449 338 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 INF2Q27J81 1249 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 MBLAC2Q68D91 279 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 ARHGEF18Q6ZSZ5 1173 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 FRS2Q8WU20 508 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms