RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 SLC30A4O14863 429 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 MMP1P03956 469 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 CTNNB1P35222 781 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 BMPR1AP36894 532 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 MCAMP43121 646 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 GNAI1P63096 354 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 LMNB2Q03252 620 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 BFSP2Q13515 415 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 IKBKEQ14164 716 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 CCDC6Q16204 474 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 TRIM71Q2Q1W2 868 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 LRRFIP1Q32MZ4 808 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 CERKLQ49MI3 558 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 UNQ6494/PRO21346Q6UXR6 183 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 Q6ZNB5 142 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 AFAP1L1Q8TED9 768 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 ATP8B4Q8TF62 1192 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 AP5M1Q9H0R1 490 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 LMAN2LQ9H0V9 348 aa8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 GNL3LQ9NVN8 582 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-216ENST00000519489 PDS5AQ29RF7 1337 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 COL4A3Q01955 1670 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 E9PSI1 815 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 MYL3P08590 195 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 CKBP12277 381 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 RBL2Q08999 1139 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 SPTY2D1Q68D10 685 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 GDF6Q6KF10 455 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 SYCE2Q6PIF2 218 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 BLOC1S3Q6QNY0 202 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 FBXO16Q8IX29 292 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 DBF4BQ8NFT6 615 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 FEZF2Q8TBJ5 459 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 YME1L1Q96TA2 773 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 APOL5Q9BWW9 433 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 TRIM34Q9BYJ4 488 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 C9orf78Q9NZ63 289 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 HMG20BQ9P0W2 317 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 DLGAP2Q9P1A6 1054 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 PLAGL2Q9UPG8 496 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 MCM3APO60318 1980 aa8.35□□□□□ -1.07
CTNNA1-216ENST00000519489 IL16Q14005 1332 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 PER2O15055 1255 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 GPR37O15354 613 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 ZEB2O60315 1214 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 UPP2O95045 317 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 CFHP08603 1231 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 HOXD8P13378 290 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 PLCD1P51178 756 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 PTGISQ16647 500 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 NFRKBQ6P4R8 1299 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 EEPD1Q7L9B9 569 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 NCDNQ9UBB6 729 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 PPP1R9AQ9ULJ8 1098 aa8.34□□□□□ -1.07
CTNNA1-216ENST00000519489 ANKRD17O75179 2603 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 MYO10Q9HD67 2058 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 GDF9O60383 454 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 ITGB1P05556 798 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 RB1P06400 928 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 LDHCP07864 332 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 GLULP15104 373 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 TIMM10P62072 90 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 KCNC3Q14003 757 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 ZNF618Q5T7W0 954 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 SNRNP48Q6IEG0 339 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 SPPL3Q8TCT6 385 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 RTP3Q9BQQ7 232 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 C11orf84Q9BUA3 381 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 RC3H2Q9HBD1 1191 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 RAI14Q9P0K7 980 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 USP18Q9UMW8 372 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 Q9Y3F1 56 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 FREM2Q5SZK8 3169 aa8.33□□□□□ -1.08
CTNNA1-216ENST00000519489 SCN10AQ9Y5Y9 1956 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 EFCAB14O75071 495 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 AMHP03971 560 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 SPINK2P20155 84 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 GABPAQ06546 454 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 TWISTNBQ3B726 338 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 SIX5Q8N196 739 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 CAGE1Q8TC20 777 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 MAP4K1Q92918 833 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 CLP1Q92989 425 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 PURBQ96QR8 312 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 EHD4Q9H223 541 aa8.32□□□□□ -1.08
CTNNA1-216ENST00000519489 POMKQ9H5K3 350 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms