RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 C2orf27AQ580R0 203 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 ETV3LQ6ZN32 361 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 B3GNT8Q7Z7M8 397 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 MTDHQ86UE4 582 aaKnown RBP5.66□□□□□ -1.5
SKP1-205ENST00000519054 TMEM151BQ8IW70 566 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 FAM26EQ8N5C1 309 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 PIP4K2CQ8TBX8 421 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 THAP3Q8WTV1 239 aaPredicted RBP5.66□□□□□ -1.5
SKP1-205ENST00000519054 CPA5Q8WXQ8 436 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 PTPRN2Q92932 1015 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 KISS1RQ969F8 398 aaPredicted RBP5.66□□□□□ -1.5
SKP1-205ENST00000519054 DDX11Q96FC9 970 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 MRFAP1L1Q96HT8 127 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 ALG1Q9BT22 464 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 ZNF652Q9Y2D9 606 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 PCDHB4Q9Y5E5 795 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 AQP7O14520 342 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 C8BP07358 591 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 COL6A2P12110 1019 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 STAT5AP42229 794 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 EMC4Q5J8M3 183 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 CD300LDQ6UXZ3 194 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 SPOCD1Q6ZMY3 1216 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 MAMDC2Q7Z304 686 aaPredicted RBP5.65□□□□□ -1.5
SKP1-205ENST00000519054 MIB1Q86YT6 1006 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 ARRDC4Q8NCT1 418 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 SYT3Q9BQG1 590 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 YIPF4Q9BSR8 244 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 IPPKQ9H8X2 491 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 PCDHA8Q9Y5H6 950 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 PTCH2Q9Y6C5 1203 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 PMF1-BGLAPU3KQ54 211 aa5.65□□□□□ -1.5
SKP1-205ENST00000519054 ADAMTS20P59510 1910 aa5.65□□□□□ -1.51
SKP1-205ENST00000519054 TCRBV5S2A0A599 114 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 FAM47E-STBD1D6RA91 191 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 KRIT1O00522 736 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 TADA3O75528 432 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 CYP2C8P10632 490 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 GNAT1P11488 350 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 GABREP78334 506 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 ZC3H12BQ5HYM0 836 aaKnown RBP5.64□□□□□ -1.51
SKP1-205ENST00000519054 OTOP3Q7RTS5 596 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 SIAH1Q8IUQ4 282 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 FAM126BQ8IXS8 530 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 NLGN1Q8N2Q7 840 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 JMYQ8N9B5 988 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 ZSWIM2Q8NEG5 633 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 FNIP1Q8TF40 1166 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 NOX5Q96PH1 765 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 SLC6A20Q9NP91 592 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 MYOTQ9UBF9 498 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 NDOR1Q9UHB4 597 aa5.64□□□□□ -1.51
SKP1-205ENST00000519054 SLC27A2O14975 620 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 NKRFO15226 690 aaKnown RBP eCLIP5.63□□□□□ -1.511e-7■□□□□ 8.2
SKP1-205ENST00000519054 MAFKO60675 156 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 SPIRE1Q08AE8 756 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 PAK1Q13153 545 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 ZC3H18Q86VM9 953 aaKnown RBP5.63□□□□□ -1.51
SKP1-205ENST00000519054 RBM12BQ8IXT5 1001 aaKnown RBP5.63□□□□□ -1.51
SKP1-205ENST00000519054 ZBTB8AQ96BR9 441 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 SMOC1Q9H4F8 434 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 PIF1Q9H611 641 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 SLC52A2Q9HAB3 445 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 PCDHA9Q9Y5H5 950 aa5.63□□□□□ -1.51
SKP1-205ENST00000519054 FFAR3O14843 346 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 CRTAMO95727 393 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 BMP7P18075 431 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 HTRA3P83110 453 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 GRIN1Q05586 938 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 SMAD4Q13485 552 aaKnown RBP5.62□□□□□ -1.51
SKP1-205ENST00000519054 CR1LQ2VPA4 569 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 STK32CQ86UX6 486 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 ADGRG2Q8IZP9 1017 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 PHOSPHO1Q8TCT1 267 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 TOE1Q96GM8 510 aaKnown RBP5.62□□□□□ -1.51
SKP1-205ENST00000519054 GORASP1Q9BQQ3 440 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 KANSL2Q9H9L4 492 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 DTLQ9NZJ0 730 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 ASH2LQ9UBL3 628 aa5.62□□□□□ -1.51
SKP1-205ENST00000519054 A0A1B0GTL3 188 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 NKX3-2P78367 333 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 CYP4F22Q6NT55 531 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 PCDH19Q8TAB3 1148 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 UHMK1Q8TAS1 419 aaKnown RBP5.61□□□□□ -1.51
SKP1-205ENST00000519054 SLC7A14Q8TBB6 771 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 SH3TC2Q8TF17 1288 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 ZNF526Q8TF50 670 aaPredicted RBP5.61□□□□□ -1.51
SKP1-205ENST00000519054 SFMBT1Q9UHJ3 866 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 DSEQ9UL01 958 aa5.61□□□□□ -1.51
SKP1-205ENST00000519054 CCDC163A0A0D9SF12 145 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.6□□□□□ -1.51
SKP1-205ENST00000519054 BTBD11A6QL63 1104 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 ARVCFO00192 962 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 TRIM13O60858 407 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 RASGRP1O95267 797 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms