RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	PCDH10	Q9P2E7	1040 aa		27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	NID2	Q14112	1375 aa		27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	SOX1	O00570	391 aa	Predicted RBP	27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	FOS	P01100	380 aa	Predicted RBP	27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	UBA1	P22314	1058 aa	Known RBP	27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	ADCY7	P51828	1080 aa		27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	CHMP4BP1	P59074	171 aa		27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	WWC2	Q6AWC2	1192 aa		27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	PSRC1	Q6PGN9	363 aa	Predicted RBP	27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	RNPC3	Q96LT9	517 aa	Known RBP	27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	ZSWIM6	Q9HCJ5	1215 aa		27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	BARHL2	Q9NY43	387 aa		27.74	■■■□□ 2.03
CNOT7-204	ENST00000518885	LAMA3	Q16787	3333 aa		27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	SPATA31C2	B4DYI2	1134 aa		27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	NOP56	O00567	594 aa	Known RBP	27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	MRPS9	P82933	396 aa	Known RBP	27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	FUT2	Q10981	343 aa		27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	CCDC155	Q8N6L0	562 aa		27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	LRCH3	Q96II8	777 aa		27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	RIC8A	Q9NPQ8	531 aa		27.73	■■■□□ 2.03
CNOT7-204	ENST00000518885	CDC27	P30260	824 aa		27.72	■■■□□ 2.03
CNOT7-204	ENST00000518885	MCTP2	Q6DN12	878 aa		27.72	■■■□□ 2.03
CNOT7-204	ENST00000518885	SESTD1	Q86VW0	696 aa		27.72	■■■□□ 2.03
CNOT7-204	ENST00000518885	C7orf31	Q8N865	590 aa		27.72	■■■□□ 2.03
CNOT7-204	ENST00000518885	SENP7	Q9BQF6	1050 aa		27.72	■■■□□ 2.03
CNOT7-204	ENST00000518885	NOC4L	Q9BVI4	516 aa	Known RBP	27.72	■■■□□ 2.03
CNOT7-204	ENST00000518885	MTIF3	Q9H2K0	278 aa	Known RBP	27.72	■■■□□ 2.03
CNOT7-204	ENST00000518885	CYP2C18	P33260	490 aa		27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	ADD1	P35611	737 aa	Known RBP	27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	C9orf50	Q5SZB4	431 aa		27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	METTL7B	Q6UX53	244 aa		27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	RPUSD2	Q8IZ73	545 aa	Known RBP	27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	GPRASP2	Q96D09	838 aa		27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	FAM217B	Q9NTX9	383 aa	Predicted RBP	27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	TRMT13	Q9NUP7	481 aa	Known RBP	27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	RTEL1	Q9NZ71	1219 aa		27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	PCDHA6	Q9UN73	950 aa		27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	PCDHA8	Q9Y5H6	950 aa		27.71	■■■□□ 2.03
CNOT7-204	ENST00000518885	SCN10A	Q9Y5Y9	1956 aa		27.7	■■■□□ 2.03
CNOT7-204	ENST00000518885	F2	P00734	622 aa		27.7	■■■□□ 2.02
CNOT7-204	ENST00000518885	HOXD8	P13378	290 aa	Predicted RBP	27.7	■■■□□ 2.02
CNOT7-204	ENST00000518885	CSF2RA	P15509	400 aa		27.7	■■■□□ 2.02
CNOT7-204	ENST00000518885	UBE2S	Q16763	222 aa		27.7	■■■□□ 2.02
CNOT7-204	ENST00000518885	PFKFB3	Q16875	520 aa	Predicted RBP	27.7	■■■□□ 2.02
CNOT7-204	ENST00000518885	RETREG2	Q8NC44	543 aa		27.7	■■■□□ 2.02
CNOT7-204	ENST00000518885	SMCO2	A6NFE2	343 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	STXBP3	O00186	592 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	MAFG	O15525	162 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	SCG2	P13521	617 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	PSEN2	P49810	448 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	EVC	P57679	992 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	SP2	Q02086	613 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	AP3B2	Q13367	1082 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	BFSP2	Q13515	415 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	HSDL1	Q3SXM5	330 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	ZFP91	Q96JP5	570 aa	Predicted RBP	27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	IL23A	Q9NPF7	189 aa		27.69	■■■□□ 2.02
CNOT7-204	ENST00000518885	PITPNM1	O00562	1244 aa		27.68	■■■□□ 2.02
CNOT7-204	ENST00000518885	PFKM	P08237	780 aa		27.68	■■■□□ 2.02
CNOT7-204	ENST00000518885	SMAD3	P84022	425 aa	Known RBP	27.68	■■■□□ 2.02
CNOT7-204	ENST00000518885	MFSD10	Q14728	455 aa		27.68	■■■□□ 2.02
CNOT7-204	ENST00000518885	PTGIS	Q16647	500 aa		27.68	■■■□□ 2.02
CNOT7-204	ENST00000518885	CPLX2	Q6PUV4	134 aa	Known RBP	27.68	■■■□□ 2.02
CNOT7-204	ENST00000518885	PRPF3	O43395	683 aa	Known RBP	27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	ZNF286B	P0CG31	522 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	RFC2	P35250	354 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	EPHB4	P54760	987 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	ANAPC15	P60006	121 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	MTMR1	Q13613	665 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	KIAA0753	Q2KHM9	967 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	CYFIP1	Q7L576	1253 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	TRIM22	Q8IYM9	498 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	KAT2B	Q92831	832 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	RNF26	Q9BY78	433 aa	Predicted RBP	27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	C6orf50	Q9HD87	102 aa		27.67	■■■□□ 2.02
CNOT7-204	ENST00000518885	CYP2C9	P11712	490 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	GNA11	P29992	359 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	PDIA3	P30101	505 aa	Known RBP	27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	CCL23	P55773	120 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	FAM109B	Q6ICB4	259 aa	Predicted RBP	27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	CCDC148	Q8NFR7	591 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	CAGE1	Q8TC20	777 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	BICD2	Q8TD16	824 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	ZNF274	Q96GC6	653 aa	Predicted RBP	27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	ALG1	Q9BT22	464 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	PDRG1	Q9NUG6	133 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	ZNF215	Q9UL58	517 aa	Predicted RBP	27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	SZT2	Q5T011	3432 aa		27.66	■■■□□ 2.02
CNOT7-204	ENST00000518885	ESYT2	A0FGR8	921 aa		27.65	■■■□□ 2.02
CNOT7-204	ENST00000518885	CPLX1	O14810	134 aa		27.65	■■■□□ 2.02
CNOT7-204	ENST00000518885	SORBS3	O60504	671 aa		27.65	■■■□□ 2.02
CNOT7-204	ENST00000518885	IFNAR1	P17181	557 aa		27.65	■■■□□ 2.02
CNOT7-204	ENST00000518885	DEFB123	Q8N688	67 aa		27.65	■■■□□ 2.02
CNOT7-204	ENST00000518885	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
CNOT7-204	ENST00000518885	GTF2IRD1	Q9UHL9	959 aa		27.65	■■■□□ 2.02
CNOT7-204	ENST00000518885	HAS3	O00219	553 aa		27.64	■■■□□ 2.02
CNOT7-204	ENST00000518885	FGB	P02675	491 aa		27.64	■■■□□ 2.02
CNOT7-204	ENST00000518885	TMEM240	Q5SV17	173 aa		27.64	■■■□□ 2.02
CNOT7-204	ENST00000518885	UPF3B	Q9BZI7	483 aa	Known RBP	27.64	■■■□□ 2.02
CNOT7-204	ENST00000518885	UBIAD1	Q9Y5Z9	338 aa		27.64	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms