RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 ZPR1O75312 459 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 LDHCP07864 332 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 ZCWPW2Q504Y3 356 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 TTMPQ5BVD1 217 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 C8orf74Q6P047 294 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 ARL8AQ96BM9 186 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 DNAJC19Q96DA6 116 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 NOX5Q96PH1 765 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 RABEP2Q9H5N1 569 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 MYH4Q9Y623 1939 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 RBAK-RBAKDNI3L0D1 243 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 GNPATO15228 680 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 NOVP48745 357 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 ADCY7P51828 1080 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 PDIA5Q14554 519 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 DNAJC21Q5F1R6 531 aaKnown RBP18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 EMBQ6PCB8 327 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 PACS2Q86VP3 889 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 KANSL2Q9H9L4 492 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 ZSCAN5CA6NGD5 496 aaPredicted RBP18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 GLI1P08151 1106 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 COASYQ13057 564 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 TTC19Q6DKK2 380 aaPredicted RBP18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 ZNF804AQ7Z570 1209 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 CAVIN3Q969G5 261 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 CAPS2Q9BXY5 557 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 RIC8AQ9NPQ8 531 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 ATAD5Q96QE3 1844 aa18.3■□□□□ 0.52
PCDHGA11-202ENST00000518882 GOLGA8KD6RF30 607 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 TNFRSF8P28908 595 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 CCT5P48643 541 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 DNA2P51530 1060 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 RHBDL3P58872 404 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 UBE2SQ16763 222 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 MYOCDQ8IZQ8 938 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 TSG101Q99816 390 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 COL4A3BPQ9Y5P4 624 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 FOCADQ5VW36 1801 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 PALMO75781 387 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 NOP2P46087 812 aaKnown RBP18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 PSMD2Q13200 908 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 GRAPQ13588 217 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 RNF10Q8N5U6 811 aaKnown RBP18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 GRAPLQ8TC17 118 aaPredicted RBP18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 HAS1Q92839 578 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 EDEM3Q9BZQ6 932 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 TBC1D7Q9P0N9 293 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 CEP72Q9P209 647 aa18.29■□□□□ 0.52
PCDHGA11-202ENST00000518882 ESYT3A0FGR9 886 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 TRAF5O00463 557 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 FTCDO95954 541 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 FAM153BP0C7A2 387 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 TNNI2P48788 182 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 CARSP49589 748 aaKnown RBP18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 FAM153CQ494X1 144 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 PROM2Q8N271 834 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 ZIM3Q96PE6 472 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 RAB34Q9BZG1 259 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 FAM153AQ9UHL3 310 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 EPB41P11171 864 aaKnown RBP18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 GNGT1P63211 74 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 FKBP3Q00688 224 aaKnown RBP18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 CCDC40Q4G0X9 1142 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 SFMBT2Q5VUG0 894 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 UIMC1Q96RL1 719 aa18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 PACSIN2Q9UNF0 486 aaPredicted RBP18.28■□□□□ 0.52
PCDHGA11-202ENST00000518882 EIF3HO15372 352 aaKnown RBP eCLIP18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 OPA1O60313 960 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 PPP1R11O60927 126 aaPredicted RBP18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 SERPING1P05155 500 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 KLRC1P26715 233 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 ALS2CLQ60I27 953 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 ARHGEF1Q92888 912 aaKnown RBP18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 CD209Q9NNX6 404 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 GPCPD1Q9NPB8 672 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 GDF3Q9NR23 364 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 PANK4Q9NVE7 773 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 NFU1Q9UMS0 254 aa18.27■□□□□ 0.52
PCDHGA11-202ENST00000518882 hCG_1984214I3L0E3 225 aa18.26■□□□□ 0.51
PCDHGA11-202ENST00000518882 KRT14P02533 472 aa18.26■□□□□ 0.51
PCDHGA11-202ENST00000518882 GPSM2P81274 684 aa18.26■□□□□ 0.51
PCDHGA11-202ENST00000518882 FAM26FQ5R3K3 315 aa18.26■□□□□ 0.51
PCDHGA11-202ENST00000518882 FOXR2Q6PJQ5 311 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms