RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 RAD9BQ6WBX8 426 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 HDXQ7Z353 690 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 CRACR2AQ9BSW2 395 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 EPC1Q9H2F5 836 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 MTMR4Q9NYA4 1195 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 MYH2Q9UKX2 1941 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 PPARDQ03181 441 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 TERF2Q15554 542 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 SLC35F6Q8N357 371 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 COA7Q96BR5 231 aa11.14□□□□□ -0.63
MTCL1-207ENST00000518815 DHX36Q9H2U1 1008 aaKnown RBP11.14□□□□□ -0.63
MTCL1-207ENST00000518815 ZCCHC17Q9NP64 241 aaKnown RBP11.14□□□□□ -0.63
MTCL1-207ENST00000518815 KRT13P13646 458 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 FXR1P51114 621 aaKnown RBP eCLIP11.13□□□□□ -0.63
MTCL1-207ENST00000518815 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.63
MTCL1-207ENST00000518815 RIOX1Q9H6W3 641 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 MYO6Q9UM54 1294 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 DAGLAQ9Y4D2 1042 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 PRR16Q569H4 304 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 SHISA4Q96DD7 197 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 MAN2A1Q16706 1144 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 GDAP1L1Q96MZ0 367 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 MRPL44Q9H9J2 332 aaKnown RBP11.13□□□□□ -0.63
MTCL1-207ENST00000518815 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
MTCL1-207ENST00000518815 PCDHA12Q9UN75 941 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 ABCB11O95342 1321 aa11.13□□□□□ -0.63
MTCL1-207ENST00000518815 B4DLN1 442 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
MTCL1-207ENST00000518815 PDHBP11177 359 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 MTF1Q14872 753 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 IL17AQ16552 155 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 ARHGAP27Q6ZUM4 889 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 MIGA2Q7L4E1 593 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 SLFN12Q8IYM2 578 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 GUF1Q8N442 669 aaKnown RBP11.12□□□□□ -0.63
MTCL1-207ENST00000518815 BAZ2AQ9UIF9 1905 aaKnown RBP11.12□□□□□ -0.63
MTCL1-207ENST00000518815 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 PP2D1A8MPX8 630 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 WNT7AO00755 349 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 CYTH3O43739 400 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 ERLIN2O94905 339 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 ALAS1P13196 640 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 FECHP22830 423 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 CDR1P51861 262 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 MYOCDQ8IZQ8 938 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 ACRBPQ8NEB7 543 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 RASSF4Q9H2L5 321 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 GTF2A1P52655 376 aaPredicted RBP11.12□□□□□ -0.63
MTCL1-207ENST00000518815 COBLL1Q53SF7 1204 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 DNAJC21Q5F1R6 531 aaKnown RBP11.12□□□□□ -0.63
MTCL1-207ENST00000518815 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 EDEM3Q9BZQ6 932 aa11.12□□□□□ -0.63
MTCL1-207ENST00000518815 TRIM49BA6NDI0 452 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 M0R2N6 131 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
MTCL1-207ENST00000518815 SMC1AQ14683 1233 aaKnown RBP11.11□□□□□ -0.63
MTCL1-207ENST00000518815 FIGNQ5HY92 759 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 APTXQ7Z2E3 356 aaKnown RBP11.11□□□□□ -0.63
MTCL1-207ENST00000518815 FBXO11Q86XK2 927 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 DCAF4Q8WV16 495 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 MED15Q96RN5 788 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.11□□□□□ -0.635e-8■■■■■ 169.5
MTCL1-207ENST00000518815 TMOD4Q9NZQ9 345 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 POLLQ9UGP5 575 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 SAR1BQ9Y6B6 198 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 ECM29Q5VYK3 1845 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 EP400Q96L91 3159 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 A0A1W2PQJ5 194 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 TTC26A0AVF1 554 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 FAM170AA1A519 330 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 ANKRD65E5RJM6 399 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 UBXN2AP68543 259 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 ZNF543Q08ER8 600 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 RAPGEF1Q13905 1077 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 TTI2Q6NXR4 508 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 HHIPL2Q6UWX4 724 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 TPH2Q8IWU9 490 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 CHURC1Q8WUH1 139 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 RAD54LQ92698 747 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
MTCL1-207ENST00000518815 HINFPQ9BQA5 517 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 PARD6BQ9BYG5 372 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 KANSL2Q9H9L4 492 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 DNM3Q9UQ16 869 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 ZBTB5O15062 677 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 ZBTB7AO95365 584 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 FOSP01100 380 aaPredicted RBP11.11□□□□□ -0.63
MTCL1-207ENST00000518815 HARSP12081 509 aaKnown RBP11.11□□□□□ -0.63
MTCL1-207ENST00000518815 CYP4A11Q02928 519 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 ZSCAN26Q16670 478 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 TYW1BQ6NUM6 668 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 DNAJC7Q99615 494 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 VPS33BQ9H267 617 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 TDRD3Q9H7E2 651 aaKnown RBP11.11□□□□□ -0.63
MTCL1-207ENST00000518815 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 PLIN4Q96Q06 1357 aa11.11□□□□□ -0.63
MTCL1-207ENST00000518815 CCDC169A6NNP5 214 aa11.1□□□□□ -0.63
MTCL1-207ENST00000518815 EIF3CLB5ME19 914 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms