RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 F8W031 263 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 KRIT1O00522 736 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 TADA3O75528 432 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 CKMP06732 381 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 KCNA6P17658 529 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 SDSP20132 328 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 POU3F2P20265 443 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 FLT3P36888 993 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 TM4SF20Q53R12 229 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 ZC3H14Q6PJT7 736 aaKnown RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 ZC3H7AQ8IWR0 971 aaKnown RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 PHOSPHO1Q8TCT1 267 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 JAM3Q9BX67 310 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 CELF4Q9BZC1 486 aaKnown RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 PDGFDQ9GZP0 370 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 EPB41L4BQ9H329 900 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 ZNF652Q9Y2D9 606 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 PRKAB1Q9Y478 270 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 NUB1Q9Y5A7 615 aa5.35□□□□□ -1.55
VPS13B-207ENST00000518569 ARID1BQ8NFD5 2236 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-207ENST00000518569 LRRC10BA6NIK2 292 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 HGSO14964 777 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 SGSM2O43147 1006 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 OPA1O60313 960 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 GNAT1P11488 350 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 SDHBP21912 280 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 ST5P78524 1137 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 LACTBP83111 547 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 PLEKHN1Q494U1 663 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 STEAP3Q658P3 488 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 ZCCHC8Q6NZY4 707 aaKnown RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 PRR23BQ6ZRT6 265 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 DDX53Q86TM3 631 aaKnown RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 ANKLE2Q86XL3 938 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 SMOC1Q9H4F8 434 aa5.34□□□□□ -1.55
VPS13B-207ENST00000518569 NSUN3Q9H649 340 aaKnown RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 DCP1AQ9NPI6 582 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 DBR1Q9UK59 544 aaKnown RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 TNPO3Q9Y5L0 923 aaKnown RBP5.34□□□□□ -1.55
VPS13B-207ENST00000518569 TEX51A0A1B0GUA7 166 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 CCDC66A2RUB6 948 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 DBX1A6NMT0 343 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 PRR5P85299 388 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 GPR19Q15760 415 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 CRY1Q16526 586 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 MLANAQ16655 118 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 C21orf62-AS1Q17RA5 79 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 UBE2R2Q712K3 238 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-207ENST00000518569 ZNF605Q86T29 641 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 LRRTM3Q86VH5 581 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 TRIM48Q8IWZ4 208 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 AHI1Q8N157 1196 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 FBXO15Q8NCQ5 510 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-207ENST00000518569 UHMK1Q8TAS1 419 aaKnown RBP5.33□□□□□ -1.56
VPS13B-207ENST00000518569 PIP4K2CQ8TBX8 421 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 DDX1Q92499 740 aaKnown RBP5.33□□□□□ -1.56
VPS13B-207ENST00000518569 DIRC2Q96SL1 478 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 KCNJ15Q99712 375 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 ORAI3Q9BRQ5 295 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 CATSPERZQ9NTU4 200 aa5.33□□□□□ -1.56
VPS13B-207ENST00000518569 IRS2Q9Y4H2 1338 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 IRS4O14654 1257 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-207ENST00000518569 SEMA7AO75326 666 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 SRGAP2CP0DJJ0 459 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 PYGMP11217 842 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 VIPR1P32241 457 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 SRSF3P84103 164 aaKnown RBP5.32□□□□□ -1.56
VPS13B-207ENST00000518569 ABHD17CQ6PCB6 329 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 TMC6Q7Z403 805 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 DHX37Q8IY37 1157 aaKnown RBP5.32□□□□□ -1.56
VPS13B-207ENST00000518569 NLGN4XQ8N0W4 816 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 PPM1KQ8N3J5 372 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 PALD1Q9ULE6 856 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 CBLCQ9ULV8 474 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 MAPRE3Q9UPY8 281 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 PCDHB4Q9Y5E5 795 aa5.32□□□□□ -1.56
VPS13B-207ENST00000518569 SBNO2Q9Y2G9 1366 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 A0A087X0B3 334 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 MYOCOSA0A1B0GUC4 107 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 TCRBV5S2A0A599 114 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 NKRFO15226 690 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS13B-207ENST00000518569 JMJD7P0C870 316 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 MASP1P48740 699 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 DNM2P50570 870 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 EPHA5P54756 1037 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 ZNF460Q14592 562 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 ARHGAP44Q17R89 818 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 CDCA2Q69YH5 1023 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-207ENST00000518569 OVCH1Q7RTY7 1134 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 MILR1Q7Z6M3 343 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 KIF18BQ86Y91 864 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 MIB1Q86YT6 1006 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 IGSF22Q8N9C0 903 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 TTLL11Q8NHH1 800 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 MCOLN1Q9GZU1 580 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 RNF38Q9H0F5 515 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 RXFP1Q9HBX9 757 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 SIRT5Q9NXA8 310 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms