RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 PLEKHN1Q494U1 663 aaPredicted RBP2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 ACBD5Q5T8D3 534 aaPredicted RBP2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 CDCA2Q69YH5 1023 aaPredicted RBP2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 WWC2Q6AWC2 1192 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 TMC5Q6UXY8 1006 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 CYP2R1Q6VVX0 501 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 ARHGAP36Q6ZRI8 547 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 OVCH1Q7RTY7 1134 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 KIAA0907Q7Z7F0 614 aaPredicted RBP2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 LRRTM3Q86VH5 581 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 SPPL2CQ8IUH8 684 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 DDX11Q96FC9 970 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 MAGEB10Q96LZ2 347 aaPredicted RBP2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 CCDC140Q96MF4 163 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 GPR101Q96P66 508 aaPredicted RBP2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 CNTD2Q9H8S5 307 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 VTA1Q9NP79 307 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 PDLIM7Q9NR12 457 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 IFT57Q9NWB7 429 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 MAGEL2Q9UJ55 1249 aa2.66□□□□□ -1.98
TVP23C-CDRT4-202ENST00000518506 RASSF10A6NK89 507 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 GSG1L2A8MUP6 293 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ARVCFO00192 962 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 MAN2B1O00754 1011 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 MYO1BO43795 1136 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 PDE8AO60658 829 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 TMEM253P0C7T8 217 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ITGB5P18084 799 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 SLC9A1P19634 815 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 HSD3B2P26439 372 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 PMLP29590 882 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 MC4RP32245 332 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 KCNAB2Q13303 367 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 TUSC3Q13454 348 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 SMAD4Q13485 552 aaKnown RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 SSPNQ14714 243 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 RTP5Q14D33 572 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 CFAP100Q494V2 611 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 TRIM61Q5EBN2 209 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 STEAP3Q658P3 488 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 E4F1Q66K89 784 aaPredicted RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 TMEM132EQ6IEE7 984 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 OTOP3Q7RTS5 596 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ATG4DQ86TL0 474 aaPredicted RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 THNSL2Q86YJ6 484 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 COG1Q8WTW3 980 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 CHTF18Q8WVB6 975 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ALG3Q92685 438 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ERCC4Q92889 916 aaPredicted RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 NINJ1Q92982 152 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ZNF669Q96BR6 464 aaPredicted RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 MRPL4Q9BYD3 311 aaKnown RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 GCM1Q9NP62 436 aa2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 DCP1AQ9NPI6 582 aaPredicted RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 THG1LQ9NWX6 298 aaKnown RBP2.65□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 TCRBV5S2A0A599 114 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 PTPDC1A2A3K4 754 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 OR14I1A6ND48 311 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 FAM47E-STBD1D6RA91 191 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ZNF561-AS1K7EIQ3 104 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ETV2O00321 342 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 PLA2G1BP04054 148 aaKnown RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 KRT1P04264 644 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ASGR2P07307 311 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 MMEP08473 750 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ZBTB48P10074 688 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ATP2A2P16615 1042 aaKnown RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 PTX3P26022 381 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 CNGA1P29973 690 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 GLRBP48167 497 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 CDKN1CP49918 316 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ST5P78524 1137 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 CHRNEQ04844 493 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 PAK1Q13153 545 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 TMEM132BQ14DG7 1078 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 NR0B2Q15466 257 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 LONRF2Q1L5Z9 754 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 FNDC3BQ53EP0 1204 aaKnown RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 TMEM177Q53S58 311 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 PLEKHG4Q58EX7 1191 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ZCCHC8Q6NZY4 707 aaKnown RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 LRSAM1Q6UWE0 723 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 CD300LDQ6UXZ3 194 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 LIPIQ6XZB0 460 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 SYDE1Q6ZW31 735 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 MAMDC2Q7Z304 686 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 RNF180Q86T96 592 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 DDX1Q92499 740 aaKnown RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 FBXW5Q969U6 566 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 MFSD3Q96ES6 412 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 WNK4Q96J92 1243 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 FEZ1Q99689 392 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 ALG1Q9BT22 464 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 CCDC8Q9H0W5 538 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 SEMA4AQ9H3S1 761 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 EPB41L4AQ9HCS5 686 aaPredicted RBP2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 SLC39A2Q9NP94 309 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 SPTLC3Q9NUV7 552 aa2.64□□□□□ -1.99
TVP23C-CDRT4-202ENST00000518506 RIC8BQ9NVN3 520 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms