RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
BRD9-216ENST00000518251 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
BRD9-216ENST00000518251 SREBF1P36956 1147 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 RGS2P41220 211 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 GHRHRQ02643 423 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 FAM160A1Q05DH4 1040 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 TKFCQ3LXA3 575 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 RESP18Q5W5W9 173 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 ARL6IP4Q66PJ3 421 aaKnown RBP11.91□□□□□ -0.5
BRD9-216ENST00000518251 SNRNP48Q6IEG0 339 aaKnown RBP11.91□□□□□ -0.5
BRD9-216ENST00000518251 SHC4Q6S5L8 630 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
BRD9-216ENST00000518251 CLEC4DQ8WXI8 215 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 CLIC6Q96NY7 704 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 RNF146Q9NTX7 359 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 DACT1Q9NYF0 836 aa11.91□□□□□ -0.5
BRD9-216ENST00000518251 ZNF214Q9UL59 606 aaPredicted RBP11.91□□□□□ -0.5
BRD9-216ENST00000518251 CDH23Q9H251 3354 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 A0A1B0GVL5 298 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 NFIBO00712 420 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 NR1I2O75469 434 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 TDP2O95551 362 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 PFKFB1P16118 471 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 PRPHP41219 470 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 HSD17B4P51659 736 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 ARHGAP4P98171 946 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 TMEM132BQ14DG7 1078 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 Q3C1V9 767 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 ZSCAN23Q3MJ62 389 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 PPP4R3AQ6IN85 833 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 MOXD1Q6UVY6 613 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 LBX2Q6XYB7 198 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 MB21D1Q8N884 522 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 C4orf32Q8N8J7 132 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 GTF3C2Q8WUA4 911 aaPredicted RBP11.9□□□□□ -0.5
BRD9-216ENST00000518251 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 TEX13BQ9BXU2 312 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 CSRNP2Q9H175 543 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 NUP62CLQ9H1M0 184 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 TMEM60Q9H2L4 133 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 HOMER2Q9NSB8 354 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 FAM13BQ9NYF5 915 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 MAP3K20Q9NYL2 800 aaKnown RBP11.9□□□□□ -0.5
BRD9-216ENST00000518251 FLRT1Q9NZU1 646 aa11.9□□□□□ -0.5
BRD9-216ENST00000518251 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 VWA3AA6NCI4 1184 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 KINO60870 393 aaKnown RBP11.89□□□□□ -0.51
BRD9-216ENST00000518251 USP11P51784 963 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 NDUFA8P51970 172 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 GRIN1Q05586 938 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 FAM109BQ6ICB4 259 aaPredicted RBP11.89□□□□□ -0.51
BRD9-216ENST00000518251 PLEKHH3Q7Z736 793 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 ENGASEQ8NFI3 743 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 CRYGNQ8WXF5 182 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 TBC1D5Q92609 795 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 CLSTN2Q9H4D0 955 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 ACAD9Q9H845 621 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 DDX25Q9UHL0 483 aaKnown RBP11.89□□□□□ -0.51
BRD9-216ENST00000518251 HPSEQ9Y251 543 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
BRD9-216ENST00000518251 LAMA2P24043 3122 aaKnown RBP11.89□□□□□ -0.51
BRD9-216ENST00000518251 SLC37A4O43826 429 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 EDIL3O43854 480 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
BRD9-216ENST00000518251 LONP1P36776 959 aaKnown RBP11.88□□□□□ -0.51
BRD9-216ENST00000518251 STAT3P40763 770 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 SYKP43405 635 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 PLS1Q14651 629 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 CALCRLQ16602 461 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 NSMFQ6X4W1 530 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 SLC30A10Q6XR72 485 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 DTHD1Q6ZMT9 781 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 FMR1NBQ8N0W7 255 aaPredicted RBP11.88□□□□□ -0.51
BRD9-216ENST00000518251 MBOAT7Q96N66 472 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 MAF1Q9H063 256 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 TNMDQ9H2S6 317 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 DDX20Q9UHI6 824 aaKnown RBP11.88□□□□□ -0.51
BRD9-216ENST00000518251 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
BRD9-216ENST00000518251 DOCK3Q8IZD9 2030 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 PRUNE2Q8WUY3 3088 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 CYP3A7-CYP3A51PA0A087WV96 503 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 SYCE3A1L190 88 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 DNM1LO00429 736 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 CTAGE5O15320 804 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 IGHA2P01877 340 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 CYP3A4P08684 503 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 CYP3A7P24462 503 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 CIITAP33076 1130 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 TXLNAP40222 546 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 ZNF445P59923 1031 aa11.87□□□□□ -0.51
BRD9-216ENST00000518251 SNW1Q13573 536 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms