RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 ELOA3Q8NG57 546 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 FRS2Q8WU20 508 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 LMBR1Q8WVP7 490 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 POF1BQ8WVV4 589 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 COPS5Q92905 334 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ISL2Q96A47 359 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 FBXL18Q96ME1 805 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 CDC5LQ99459 802 aaKnown RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ACO2Q99798 780 aaKnown RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 PLCD4Q9BRC7 762 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 MCMBPQ9BTE3 642 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 ATXN3LQ9H3M9 355 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GPRC5CQ9NQ84 441 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 JADE2Q9NQC1 790 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 PRDM10Q9NQV6 1147 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GPR27Q9NS67 375 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 GFOD1Q9NXC2 390 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 PRR13Q9NZ81 148 aa3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 TMEFF2Q9UIK5 374 aaPredicted RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 NSFL1CQ9UNZ2 370 aaKnown RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 SF3B6Q9Y3B4 125 aaKnown RBP3.16□□□□□ -1.9
SCARNA3-201ENST00000517097 KRBA1A5PL33 1030 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 PRRT4C9JH25 899 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 MEFVO15553 781 aaPredicted RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ZNF500O60304 480 aaPredicted RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 PQBP1O60828 265 aaKnown RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 RNGTTO60942 597 aaKnown RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 LRIG2O94898 1065 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ZBED1O96006 694 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ALBP02768 609 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 MYBP10242 640 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 HOXB4P17483 251 aaPredicted RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ALAS2P22557 587 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 GRK2P25098 689 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 COL8A1P27658 744 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 CD68P34810 354 aaPredicted RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 MAP2K3P46734 347 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 TM4SF4P48230 202 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 PAK1Q13153 545 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 BIRC3Q13489 604 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 SLC9A5Q14940 896 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ACAP2Q15057 778 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 LLGL1Q15334 1064 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 TERF2Q15554 542 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ARHGAP44Q17R89 818 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 TUBB8Q3ZCM7 444 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 FAM47CQ5HY64 1035 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 LBX2Q6XYB7 198 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 C16orf59Q7L2K0 433 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 OTOP1Q7RTM1 612 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 CDH24Q86UP0 819 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 RASSF3Q86WH2 238 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 MYLK4Q86YV6 388 aaPredicted RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 CISD2Q8N5K1 135 aaKnown RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 C2orf69Q8N8R5 385 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 FAM156AQ8NDB6 213 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 NPLOC4Q8TAT6 608 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 UBASH3BQ8TF42 649 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 RNF141Q8WVD5 230 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 JADE3Q92613 823 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 SGCZQ96LD1 299 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 CCDC138Q96M89 665 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 NEUROD6Q96NK8 337 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 FAM193BQ96PV7 902 aaPredicted RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 DSCC1Q9BVC3 393 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ASPNQ9BXN1 380 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 CSRNP2Q9H175 543 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 RSAD1Q9HA92 442 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 SSU72Q9NP77 194 aaKnown RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 TOPORSQ9NS56 1045 aaPredicted RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 TRMT13Q9NUP7 481 aaKnown RBP3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 KCNK4Q9NYG8 393 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 RNF112Q9ULX5 631 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 AP4E1Q9UPM8 1137 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 STARD13Q9Y3M8 1113 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 ST14Q9Y5Y6 855 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 DGKBQ9Y6T7 804 aa3.15□□□□□ -1.91
SCARNA3-201ENST00000517097 CCDC66A2RUB6 948 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 DLL1O00548 723 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 WNT9AO14904 365 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 ADAM23O75077 832 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 HRGP04196 525 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 POU2F2P09086 479 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 LCP1P13796 627 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 SLC9A1P19634 815 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 LSP1P33241 339 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 ETV3P41162 512 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 CASP2P42575 452 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 CCT5P48643 541 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 PHC1P78364 1004 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 ST5P78524 1137 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 POU4F1Q01851 419 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 TRIM14Q14142 442 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 PUM3Q15397 648 aaKnown RBP3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 TESK1Q15569 626 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 ELF2Q15723 593 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 KIZQ2M2Z5 673 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 ATAT1Q5SQI0 421 aa3.14□□□□□ -1.91
SCARNA3-201ENST00000517097 L1TD1Q5T7N2 865 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms