RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 PSMC2P35998 433 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 EIF4A3P38919 411 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 PBX1P40424 430 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 FXR1P51114 621 aaKnown RBP eCLIP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ADCY7P51828 1080 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 KIF11P52732 1056 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 RASSF7Q02833 373 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 GUCY2DQ02846 1103 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CAV1Q03135 178 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 RNASELQ05823 741 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 FMR1Q06787 632 aaKnown RBP eCLIP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 DDR1Q08345 913 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TROAPQ12815 778 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CALCOCO2Q13137 446 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 BYSLQ13895 437 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 GRM4Q14833 912 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 PLCB4Q15147 1175 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SF3B3Q15393 1217 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEC23AQ15436 765 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SKIV2LQ15477 1246 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 NAB2Q15742 525 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SNCBQ16143 134 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLC18A3Q16572 532 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 INF2Q27J81 1249 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ASPRV1Q53RT3 343 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 NAALADL2Q58DX5 795 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 HERC4Q5GLZ8 1057 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLC10A5Q5PT55 438 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CEP85LQ5SZL2 805 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRAPPC3LQ5T215 181 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 AGBL2Q5U5Z8 902 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TCERG1LQ5VWI1 586 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANKRD40Q6AI12 368 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CENPPQ6IPU0 288 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 RCSD1Q6JBY9 416 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TYW1BQ6NUM6 668 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 POTEHQ6S545 545 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 LRRC31Q6UY01 552 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 RAD9BQ6WBX8 426 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 C3orf67Q6ZVT6 689 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMTC3Q6ZXV5 915 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 H2AFVQ71UI9 128 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 HS2ST1Q7LGA3 356 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 FRMD5Q7Z6J6 570 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TADA2BQ86TJ2 420 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 NBPF5PQ86XG9 351 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SUGP1Q8IWZ8 645 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CD302Q8IX05 232 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 RHOT2Q8IXI1 618 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CACNA2D3Q8IZS8 1091 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SYCP3Q8IZU3 236 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CMTR1Q8N1G2 835 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ENAHQ8N8S7 591 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SPATA4Q8NEY3 305 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF507Q8TCN5 953 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CABLES1Q8TDN4 633 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TBCKQ8TEA7 893 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 GRK7Q8WTQ7 553 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SDR42E1Q8WUS8 393 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 UBLCP1Q8WVY7 318 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CTNNBL1Q8WYA6 563 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 PIGBQ92521 554 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 LARP4BQ92615 738 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 STAMQ92783 540 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 RPGRQ92834 1020 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CAVIN3Q969G5 261 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF622Q969S3 477 aaKnown RBP eCLIP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 KIFC2Q96AC6 838 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 GRAMD1AQ96CP6 724 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CNOT6LQ96LI5 555 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC17Q96LX7 622 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM20AQ96MK3 541 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC43Q96MW1 224 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 AIFM3Q96NN9 605 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 RAB3IPQ96QF0 476 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 OSBPL9Q96SU4 736 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 MMS19Q96T76 1030 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CHP1Q99653 195 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SPZ1Q9BXG8 430 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 UBXN6Q9BZV1 441 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ROPN1BQ9BZX4 212 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZC3H12CQ9C0D7 883 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 DNAI2Q9GZS0 605 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZMYND12Q9H0C1 365 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 EPN3Q9H201 632 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TAF1DQ9H5J8 278 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLITRK6Q9H5Y7 841 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANKZF1Q9H8Y5 726 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 PSTPIP2Q9H939 334 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ROPN1Q9HAT0 212 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLC39A2Q9NP94 309 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 GPCPD1Q9NPB8 672 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 BATF3Q9NR55 127 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM217BQ9NTX9 383 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TYW1Q9NV66 732 aaKnown RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 KBTBD4Q9NVX7 518 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF446Q9NWS9 450 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 BTG4Q9NY30 223 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 BARHL2Q9NY43 387 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 AIPL1Q9NZN9 384 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms