RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 VAMP4O75379 141 aa8.05□□□□□ -1.12
RN7SKP253-201ENST00000516424 DPY19L1Q2PZI1 675 aa8.05□□□□□ -1.12
RN7SKP253-201ENST00000516424 GNPTABQ3T906 1256 aa8.05□□□□□ -1.12
RN7SKP253-201ENST00000516424 LZTR1Q8N653 840 aa8.05□□□□□ -1.12
RN7SKP253-201ENST00000516424 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
RN7SKP253-201ENST00000516424 PCDHB10Q9UN67 800 aa8.05□□□□□ -1.12
RN7SKP253-201ENST00000516424 DUSP10Q9Y6W6 482 aa8.05□□□□□ -1.12
RN7SKP253-201ENST00000516424 PTPRTO14522 1441 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 PRDM15P57071 1507 aaPredicted RBP8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 RNF17Q9BXT8 1623 aaKnown RBP8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 NBPF8Q3BBV2 869 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 HEATR6Q6AI08 1181 aaKnown RBP8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 HHIPL2Q6UWX4 724 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 CARFQ8N187 725 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 SMARCC2Q8TAQ2 1214 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 NOX5Q96PH1 765 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 GINM1Q9NU53 330 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 KANK1Q14678 1352 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 DIP2CQ9Y2E4 1556 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 E9PCH4 1651 aa8.04□□□□□ -1.12
RN7SKP253-201ENST00000516424 YEATS2Q9ULM3 1422 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 LMTK2Q8IWU2 1503 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 TET3O43151 1660 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 K7ESM1 405 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 NOBOXO60393 691 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 EPHX1P07099 455 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 SEPHS1P49903 392 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 ZXDCQ2QGD7 858 aaPredicted RBP8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 CPNE8Q86YQ8 564 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 DDX1Q92499 740 aaKnown RBP8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 FGD4Q96M96 766 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 CRBNQ96SW2 442 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 MTA3Q9BTC8 594 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 GBP3Q9H0R5 595 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 GULP1Q9UBP9 304 aa8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 CGGBP1Q9UFW8 167 aaPredicted RBP8.03□□□□□ -1.12
RN7SKP253-201ENST00000516424 C2orf71A6NGG8 1288 aa8.02□□□□□ -1.13
RN7SKP253-201ENST00000516424 ADAT2Q7Z6V5 191 aaKnown RBP8.02□□□□□ -1.13
RN7SKP253-201ENST00000516424 NETO2Q8NC67 525 aa8.02□□□□□ -1.13
RN7SKP253-201ENST00000516424 PEX11GQ96HA9 241 aa8.02□□□□□ -1.13
RN7SKP253-201ENST00000516424 PHAXQ9H814 394 aaKnown RBP8.02□□□□□ -1.13
RN7SKP253-201ENST00000516424 BACE2Q9Y5Z0 518 aa8.02□□□□□ -1.13
RN7SKP253-201ENST00000516424 UHRF1BP1Q6BDS2 1440 aa8.02□□□□□ -1.13
RN7SKP253-201ENST00000516424 INSRRP14616 1297 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 CNR2P34972 360 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 PAK2Q13177 524 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 SLC9A5Q14940 896 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 CPA5Q8WXQ8 436 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 LNPKQ9C0E8 428 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 SPATA6Q9NWH7 488 aaPredicted RBP8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 NUDT5Q9UKK9 219 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 CNOT11Q9UKZ1 510 aaKnown RBP8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 SLC12A7Q9Y666 1083 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 CCDC144AA2RUR9 1427 aa8.01□□□□□ -1.13
RN7SKP253-201ENST00000516424 A0A1W2PQH9 124 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 PPM1BO75688 479 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 GJA9P57773 515 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 AMPD2Q01433 879 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 SLC7A5Q01650 507 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 CACNB2Q08289 660 aaPredicted RBP8□□□□□ -1.13
RN7SKP253-201ENST00000516424 COL9A2Q14055 689 aaPredicted RBP8□□□□□ -1.13
RN7SKP253-201ENST00000516424 WWC2Q6AWC2 1192 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 GGT6Q6P531 493 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 KLHL6Q8WZ60 621 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 ZBTB8AQ96BR9 441 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 EFR3BQ9Y2G0 817 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 REREQ9P2R6 1566 aa8□□□□□ -1.13
RN7SKP253-201ENST00000516424 AGLP35573 1532 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 NPHP3-ACAD11A0A0J9YXS1 232 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 SOX9P48436 509 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 GIPRP48546 466 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 EIF6P56537 245 aaKnown RBP7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 SPATA31E1Q6ZUB1 1445 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 ZNF761Q86XN6 746 aaPredicted RBP7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 ARHGEF39Q8N4T4 335 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 C19orf47Q8N9M1 422 aaKnown RBP7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 USP33Q8TEY7 942 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 NTMQ9P121 344 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 SIT1Q9Y3P8 196 aa7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 CFAP65Q6ZU64 1925 aaKnown RBP7.99□□□□□ -1.13
RN7SKP253-201ENST00000516424 TRPM2O94759 1503 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 CEP152O94986 1710 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 SPHKAPQ2M3C7 1700 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 ARHGAP31Q2M1Z3 1444 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 PAMP19021 973 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 SARSP49591 514 aaKnown RBP7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 GRB10Q13322 594 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 SMAD4Q13485 552 aaKnown RBP7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 PUM1Q14671 1186 aaKnown RBP eCLIP7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 DDX11Q96FC9 970 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 WASHC2CQ9Y4E1 1318 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 ABCC3O15438 1527 aa7.98□□□□□ -1.13
RN7SKP253-201ENST00000516424 NEURL4Q96JN8 1562 aa7.97□□□□□ -1.13
RN7SKP253-201ENST00000516424 NPATQ14207 1427 aa7.97□□□□□ -1.13
RN7SKP253-201ENST00000516424 C7orf72A4D263 438 aa7.97□□□□□ -1.13
RN7SKP253-201ENST00000516424 ZBTB7AO95365 584 aa7.97□□□□□ -1.13
RN7SKP253-201ENST00000516424 NTRK1P04629 796 aa7.97□□□□□ -1.13
RN7SKP253-201ENST00000516424 ZNF827Q17R98 1081 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms