RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 PCDH12Q9NPG4 1184 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ATP13A2Q9NQ11 1180 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ZNF277Q9NRM2 450 aaPredicted RBP9.58□□□□□ -0.88
SFXN1-211ENST00000515736 TMEM260Q9NX78 707 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 PCDHB14Q9Y5E9 798 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ZMYM6O95789 1325 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 GOLIM4O00461 696 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 ATE1O95260 518 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 PDE8BO95263 885 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 PTPRAP18433 802 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 TIMM10P62072 90 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 CTBSQ01459 385 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 PTPN11Q06124 597 aaPredicted RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 PKP1Q13835 747 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 PUM3Q15397 648 aaKnown RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 HLFQ16534 295 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 CCDC152Q4G0S7 254 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 OLFM4Q6UX06 510 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 KIAA0907Q7Z7F0 614 aaPredicted RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 SYT9Q86SS6 491 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 RTKN2Q8IZC4 609 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 VGLL2Q8N8G2 317 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 LPIN2Q92539 896 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 ANP32BQ92688 251 aaKnown RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 CDC5LQ99459 802 aaKnown RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 UTP14AQ9BVJ6 771 aaKnown RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 TAF1DQ9H5J8 278 aaPredicted RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 PRR12Q9ULL5 1215 aa9.57□□□□□ -0.88
SFXN1-211ENST00000515736 POLR3KQ9Y2Y1 108 aaPredicted RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 MYO5AQ9Y4I1 1855 aaKnown RBP9.57□□□□□ -0.88
SFXN1-211ENST00000515736 ZNF541Q9H0D2 1346 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 MAST2Q6P0Q8 1798 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 PPP1R12AO14974 1030 aaPredicted RBP9.56□□□□□ -0.88
SFXN1-211ENST00000515736 MARCH6O60337 910 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 ESRRAP11474 423 aaPredicted RBP9.56□□□□□ -0.88
SFXN1-211ENST00000515736 SYT1P21579 422 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 GJB2P29033 226 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 ALDH1B1P30837 517 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 HMGN5P82970 282 aaKnown RBP9.56□□□□□ -0.88
SFXN1-211ENST00000515736 UBE3CQ15386 1083 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 ARSHQ5FYA8 562 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 PDZD3Q86UT5 571 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 RPGRQ92834 1020 aaKnown RBP9.56□□□□□ -0.88
SFXN1-211ENST00000515736 TMX1Q9H3N1 280 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 GREM2Q9H772 168 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 CNNM1Q9NRU3 951 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 HACL1Q9UJ83 578 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 MAST3O60307 1309 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 ELP1O95163 1332 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 UBN2Q6ZU65 1347 aa9.56□□□□□ -0.88
SFXN1-211ENST00000515736 CNTNAP1P78357 1384 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 SIN3BO75182 1162 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 GJB6O95452 261 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 CYP21A2P08686 494 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 HSPD1P10809 573 aaKnown RBP9.55□□□□□ -0.88
SFXN1-211ENST00000515736 SLC5A1P13866 664 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 CPB1P15086 417 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 EPHX2P34913 555 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
SFXN1-211ENST00000515736 EVCP57679 992 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 UBE2HP62256 183 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 TBC1D8BQ0IIM8 1120 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 SQSTM1Q13501 440 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 ME3Q16798 604 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 IMMTQ16891 758 aaKnown RBP9.55□□□□□ -0.88
SFXN1-211ENST00000515736 PKDCCQ504Y2 493 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 ZNF468Q5VIY5 522 aaPredicted RBP9.55□□□□□ -0.88
SFXN1-211ENST00000515736 ATL3Q6DD88 541 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 NOL8Q76FK4 1167 aaKnown RBP9.55□□□□□ -0.88
SFXN1-211ENST00000515736 FAM35AQ86V20 835 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 SYNE4Q8N205 404 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 MICALL1Q8N3F8 863 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 C19orf47Q8N9M1 422 aaKnown RBP9.55□□□□□ -0.88
SFXN1-211ENST00000515736 JDP2Q8WYK2 163 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 GTF3C6Q969F1 213 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 PUS3Q9BZE2 481 aaKnown RBP9.55□□□□□ -0.88
SFXN1-211ENST00000515736 NYXQ9GZU5 481 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
SFXN1-211ENST00000515736 KLRG2A4D1S0 409 aaPredicted RBP9.54□□□□□ -0.88
SFXN1-211ENST00000515736 PFKFB2O60825 505 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 XRCC6P12956 609 aaKnown RBP eCLIP9.54□□□□□ -0.88
SFXN1-211ENST00000515736 FGFR2P21802 821 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 GPTP24298 496 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 IGHMBP2P38935 993 aaKnown RBP9.54□□□□□ -0.88
SFXN1-211ENST00000515736 TOB2Q14106 344 aaPredicted RBP9.54□□□□□ -0.88
SFXN1-211ENST00000515736 PPP2R5EQ16537 467 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 ZSCAN23Q3MJ62 389 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 C2orf27AQ580R0 203 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 RUFY4Q6ZNE9 571 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 CCDC83Q8IWF9 413 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 FAM184AQ8NB25 1140 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 EDC3Q96F86 508 aaKnown RBP9.54□□□□□ -0.88
SFXN1-211ENST00000515736 ZNF274Q96GC6 653 aaPredicted RBP9.54□□□□□ -0.88
SFXN1-211ENST00000515736 MPHOSPH8Q99549 860 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
SFXN1-211ENST00000515736 ADAMTSL1Q8N6G6 1762 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 DUOX1Q9NRD9 1551 aa9.54□□□□□ -0.88
SFXN1-211ENST00000515736 PASKQ96RG2 1323 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms