RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SNAPC2Q13487 334 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 ARHGEF16Q5VV41 709 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 OTOP1Q7RTM1 612 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 CATSPER3Q86XQ3 398 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 TEX2Q8IWB9 1127 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 GSDMAQ96QA5 445 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 PDCD2LQ9BRP1 358 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 ACAD9Q9H845 621 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 KCNH7Q9NS40 1196 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 RBPJLQ9UBG7 517 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 VAV3Q9UKW4 847 aa10.28□□□□□ -0.76
CPNE4-213ENST00000515418 MYPNQ86TC9 1320 aa10.27□□□□□ -0.76
CPNE4-213ENST00000515418 E9PMD0 336 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 GOLGA6L19H0YKK7 550 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 DDX39AO00148 427 aaKnown RBP10.27□□□□□ -0.77
CPNE4-213ENST00000515418 CNMDO75829 334 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 PSMD10O75832 226 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
CPNE4-213ENST00000515418 RPN1P04843 607 aaKnown RBP10.27□□□□□ -0.77
CPNE4-213ENST00000515418 SPATA31C1P0DKV0 1188 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 CYP2C8P10632 490 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 PSMC6P62333 389 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 CYP4A11Q02928 519 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 TKFCQ3LXA3 575 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 LRCH2Q5VUJ6 765 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 FASTKD5Q7L8L6 764 aaKnown RBP10.27□□□□□ -0.77
CPNE4-213ENST00000515418 DYMQ7RTS9 669 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 SLC5A5Q92911 643 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 MED15Q96RN5 788 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 ZNF577Q9BSK1 485 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 MAP3K20Q9NYL2 800 aaKnown RBP10.27□□□□□ -0.77
CPNE4-213ENST00000515418 RGL1Q9NZL6 768 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 PNMA2Q9UL42 364 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 MAPK8IP1Q9UQF2 711 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 LOC285556D6RIA3 1793 aa10.27□□□□□ -0.77
CPNE4-213ENST00000515418 POTEFA5A3E0 1075 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 DCAF8L1A6NGE4 600 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 MYMKA6NI61 221 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 IPO5O00410 1097 aaKnown RBP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 KLRC4O43908 158 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 GAS7O60861 476 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 NR3C2P08235 984 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 FSTL1Q12841 308 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 NCAPHQ15003 741 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 TMEM119Q4V9L6 283 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 HSP90AA4PQ58FG1 418 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 KLHL10Q6JEL2 608 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 SV2BQ7L1I2 683 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 ANKRD35Q8N283 1001 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 RAD54LQ92698 747 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 PPP1R9BQ96SB3 815 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 MOV10L1Q9BXT6 1211 aaKnown RBP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 SPATC1LQ9H0A9 340 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 UBIAD1Q9Y5Z9 338 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 TESPA1A2RU30 521 aaPredicted RBP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 ZBTB39O15060 712 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 ATP9AO75110 1047 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 SSBP05455 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 CCDC173Q0VFZ6 552 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 CTTNQ14247 550 aaKnown RBP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 VSIG10LQ86VR7 867 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 TRMT44Q8IYL2 757 aaKnown RBP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 SAMD3Q8N6K7 520 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 MB21D1Q8N884 522 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 MLKLQ8NB16 471 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 LARP4BQ92615 738 aaKnown RBP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 HPS3Q969F9 1004 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 PDLIM2Q96JY6 352 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 EIF2AK1Q9BQI3 630 aaKnown RBP10.26□□□□□ -0.77
CPNE4-213ENST00000515418 BPIFA3Q9BQP9 254 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 TRIM9Q9C026 710 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 HSD3B7Q9H2F3 369 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 UNC45AQ9H3U1 944 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 CUEDC2Q9H467 287 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 BCAS3Q9H6U6 928 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 GDAQ9Y2T3 454 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 KIAA1217Q5T5P2 1943 aa10.26□□□□□ -0.77
CPNE4-213ENST00000515418 RBBP6Q7Z6E9 1792 aaKnown RBP10.25□□□□□ -0.77
CPNE4-213ENST00000515418 CCL15-CCL14A0A0B4J2E2 113 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 NPHP3-ACAD11A0A0J9YXS1 232 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 BTBD19C9JJ37 291 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 DHX15O43143 795 aaKnown RBP10.25□□□□□ -0.77
CPNE4-213ENST00000515418 SLITRK3O94933 977 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 ERCC3P19447 782 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 OSBPP22059 807 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 STX17P56962 302 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 ITGB3BPQ13352 177 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-213ENST00000515418 MTMR1Q13613 665 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 CCL15Q16663 113 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 TRIML1Q8N9V2 468 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms