RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GRK4P32298 578 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 ZNF174Q15697 407 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 TAPT1Q6NXT6 567 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 SEPT14Q6ZU15 432 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 EEPD1Q7L9B9 569 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 POLR3EQ9NVU0 708 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 CEP131Q9UPN4 1083 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 LAD1O00515 517 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 TBX3O15119 743 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 ZNF865P0CJ78 1059 aaPredicted RBP23.78■■□□□ 1.4
LSM6-207ENST00000515311 CYBAP13498 195 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 MAP3K21Q5TCX8 1036 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 ANO1Q5XXA6 986 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 USP28Q96RU2 1077 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 KCNMB3Q9NPA1 279 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 CFAP45Q9UL16 551 aa23.78■■□□□ 1.4
LSM6-207ENST00000515311 TCHHQ07283 1943 aa23.77■■□□□ 1.4
LSM6-207ENST00000515311 NASPP49321 788 aaPredicted RBP23.77■■□□□ 1.4
LSM6-207ENST00000515311 DNM1Q05193 864 aaKnown RBP23.77■■□□□ 1.4
LSM6-207ENST00000515311 SEMA3FQ13275 785 aa23.77■■□□□ 1.4
LSM6-207ENST00000515311 SF3A1Q15459 793 aaKnown RBP23.77■■□□□ 1.4
LSM6-207ENST00000515311 FBXO46Q6PJ61 603 aaPredicted RBP23.77■■□□□ 1.4
LSM6-207ENST00000515311 ETNPPLQ8TBG4 499 aa23.77■■□□□ 1.4
LSM6-207ENST00000515311 FAM20AQ96MK3 541 aa23.77■■□□□ 1.4
LSM6-207ENST00000515311 AGO4Q9HCK5 861 aaKnown RBP23.77■■□□□ 1.4
LSM6-207ENST00000515311 ZHX1Q9UKY1 873 aaPredicted RBP23.77■■□□□ 1.4
LSM6-207ENST00000515311 CLIC4Q9Y696 253 aa23.77■■□□□ 1.4
LSM6-207ENST00000515311 MRVI1Q9Y6F6 885 aa23.77■■□□□ 1.4
LSM6-207ENST00000515311 MORC2Q9Y6X9 1032 aaPredicted RBP23.77■■□□□ 1.4
LSM6-207ENST00000515311 MSH4O15457 936 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 ARP10275 920 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 PRKAR2AP13861 404 aaKnown RBP23.76■■□□□ 1.39
LSM6-207ENST00000515311 KRT85P78386 507 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 CACNB2Q08289 660 aaPredicted RBP23.76■■□□□ 1.39
LSM6-207ENST00000515311 PTGDRQ13258 359 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 TTLL4Q14679 1199 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 CALCRLQ16602 461 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 CCDC144BQ3MJ40 725 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 FOXD4L6Q3SYB3 417 aaPredicted RBP23.76■■□□□ 1.39
LSM6-207ENST00000515311 IQSEC1Q6DN90 963 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 CCDC62Q6P9F0 684 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 FOXD4L3Q6VB84 417 aaPredicted RBP23.76■■□□□ 1.39
LSM6-207ENST00000515311 C4orf32Q8N8J7 132 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 MTMR9Q96QG7 549 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 SENP7Q9BQF6 1050 aa23.76■■□□□ 1.39
LSM6-207ENST00000515311 FTOQ9C0B1 505 aaKnown RBP eCLIP23.76■■□□□ 1.39
LSM6-207ENST00000515311 IPO5O00410 1097 aaKnown RBP23.75■■□□□ 1.39
LSM6-207ENST00000515311 YEATS4O95619 227 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 INHAP05111 366 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 ATP2C1P98194 919 aaPredicted RBP23.75■■□□□ 1.39
LSM6-207ENST00000515311 TRIM32Q13049 653 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 PRAMEF19Q5SWL8 479 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 SLFN12Q8IYM2 578 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 GIMAP8Q8ND71 665 aaPredicted RBP23.75■■□□□ 1.39
LSM6-207ENST00000515311 TRPV1Q8NER1 839 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 SLC5A5Q92911 643 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 TNPO1Q92973 898 aaKnown RBP23.75■■□□□ 1.39
LSM6-207ENST00000515311 ZNF577Q9BSK1 485 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 PDGFCQ9NRA1 345 aa23.75■■□□□ 1.39
LSM6-207ENST00000515311 TFIP11Q9UBB9 837 aaKnown RBP23.75■■□□□ 1.39
LSM6-207ENST00000515311 BAG4O95429 457 aaKnown RBP23.74■■□□□ 1.39
LSM6-207ENST00000515311 OR52Z1P0C646 297 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 KCNA2P16389 499 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 PRPHP41219 470 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 PTPAQ15257 358 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 SLC9C1Q4G0N8 1177 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 HAS1Q92839 578 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 RIT2Q99578 217 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 TMEM60Q9H2L4 133 aa23.74■■□□□ 1.39
LSM6-207ENST00000515311 DDX41Q9UJV9 622 aaKnown RBP23.74■■□□□ 1.39
LSM6-207ENST00000515311 DOCK5Q9H7D0 1870 aa23.73■■□□□ 1.39
LSM6-207ENST00000515311 NKRFO15226 690 aaKnown RBP eCLIP23.73■■□□□ 1.39
LSM6-207ENST00000515311 ARIH2O95376 493 aa23.73■■□□□ 1.39
LSM6-207ENST00000515311 TXNP10599 105 aaKnown RBP23.73■■□□□ 1.39
LSM6-207ENST00000515311 UBA1P22314 1058 aaKnown RBP23.73■■□□□ 1.39
LSM6-207ENST00000515311 ADCYAP1R1P41586 468 aa23.73■■□□□ 1.39
LSM6-207ENST00000515311 CEBPZQ03701 1054 aaKnown RBP23.73■■□□□ 1.39
LSM6-207ENST00000515311 SLC39A14Q15043 492 aa23.73■■□□□ 1.39
LSM6-207ENST00000515311 ARL6IP4Q66PJ3 421 aaKnown RBP23.73■■□□□ 1.39
LSM6-207ENST00000515311 TBC1D22BQ9NU19 505 aa23.73■■□□□ 1.39
LSM6-207ENST00000515311 FAM184BQ9ULE4 1060 aa23.73■■□□□ 1.39
LSM6-207ENST00000515311 NFASCO94856 1347 aa23.73■■□□□ 1.39
LSM6-207ENST00000515311 SEPT4O43236 478 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 ATP9AO75110 1047 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 AKR1A1P14550 325 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 SP2Q02086 613 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 TNFAIP2Q03169 654 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 ITGB3BPQ13352 177 aaPredicted RBP23.72■■□□□ 1.39
LSM6-207ENST00000515311 NEDD9Q14511 834 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 DUSP28Q4G0W2 176 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 LINC00301Q8NCQ3 95 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 SH3TC2Q8TF17 1288 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 SDF4Q9BRK5 362 aa23.72■■□□□ 1.39
LSM6-207ENST00000515311 SCAND2PQ9GZW5 306 aaPredicted RBP23.72■■□□□ 1.39
LSM6-207ENST00000515311 DHX15O43143 795 aaKnown RBP23.71■■□□□ 1.39
LSM6-207ENST00000515311 MARCH6O60337 910 aa23.71■■□□□ 1.39
LSM6-207ENST00000515311 PSMD10O75832 226 aa23.71■■□□□ 1.39
LSM6-207ENST00000515311 NCLP19338 710 aaKnown RBP23.71■■□□□ 1.39
LSM6-207ENST00000515311 MAPK8IP2Q13387 824 aaPredicted RBP23.71■■□□□ 1.39
LSM6-207ENST00000515311 STK38Q15208 465 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms