RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 VSIG10LQ86VR7 867 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 ALG1Q9BT22 464 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 LMCD1Q9NZU5 365 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 PCDHA1Q9Y5I3 950 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 LPXNO60711 386 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 PPP1R11O60927 126 aaPredicted RBP17.47■□□□□ 0.39
DDR1-278ENST00000515233 GJB5O95377 273 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 TRAF1Q13077 416 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 CELF3Q5SZQ8 465 aaKnown RBP17.47■□□□□ 0.39
DDR1-278ENST00000515233 KRT40Q6A162 431 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 TRAF7Q6Q0C0 670 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 RAD9AQ99638 391 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 ZBED2Q9BTP6 218 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 NCOR1O75376 2440 aa17.47■□□□□ 0.39
DDR1-278ENST00000515233 MYCLP12524 364 aaPredicted RBP17.46■□□□□ 0.39
DDR1-278ENST00000515233 KCNQ1P51787 676 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 DEFB103AP81534 67 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 IKBKEQ14164 716 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 PGM5Q15124 567 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 TCTN1Q2MV58 587 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 ZNF618Q5T7W0 954 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 IL25Q9H293 177 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 RIOX1Q9H6W3 641 aa17.46■□□□□ 0.39
DDR1-278ENST00000515233 LCHNA4D1U4 455 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 ZNF286BP0CG31 522 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 SP2Q02086 613 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 SPRED2Q7Z698 418 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 TMCO2Q7Z6W1 182 aaPredicted RBP17.45■□□□□ 0.38
DDR1-278ENST00000515233 HLA-CQ95604 372 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 SPATA33Q96N06 139 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 NECAB3Q96P71 396 aaPredicted RBP17.45■□□□□ 0.38
DDR1-278ENST00000515233 C16orf70Q9BSU1 422 aa17.45■□□□□ 0.38
DDR1-278ENST00000515233 GGPS1O95749 300 aa17.44■□□□□ 0.38
DDR1-278ENST00000515233 HOXA13P31271 388 aaPredicted RBP17.44■□□□□ 0.38
DDR1-278ENST00000515233 ERVK-21P61565 698 aa17.44■□□□□ 0.38
DDR1-278ENST00000515233 ZNF200P98182 395 aaPredicted RBP17.44■□□□□ 0.38
DDR1-278ENST00000515233 TRDNQ13061 729 aa17.44■□□□□ 0.38
DDR1-278ENST00000515233 HIC1Q14526 733 aa17.44■□□□□ 0.38
DDR1-278ENST00000515233 WNT8BQ93098 351 aa17.44■□□□□ 0.38
DDR1-278ENST00000515233 BDP1A6H8Y1 2624 aa17.44■□□□□ 0.38
DDR1-278ENST00000515233 GCOM1H8Y6P7 765 aaPredicted RBP17.43■□□□□ 0.38
DDR1-278ENST00000515233 LGR5O75473 907 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 POLR2MP0CAP2 368 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 CCND2P30279 289 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 MBTPS1Q14703 1052 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 GRM4Q14833 912 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 SERINC5Q86VE9 423 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 TGS1Q96RS0 853 aaKnown RBP17.43■□□□□ 0.38
DDR1-278ENST00000515233 PIGSQ96S52 555 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 C1QTNF1Q9BXJ1 281 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 SUGCTQ9HAC7 445 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 MLXIPQ9HAP2 919 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 EMSYQ7Z589 1322 aa17.43■□□□□ 0.38
DDR1-278ENST00000515233 PNMA6FA0A0J9YX94 578 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 LINC01553A4QN01 128 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 H3BRB1 525 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 CYTH3O43739 400 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 CYP21A2P08686 494 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 UBA1P22314 1058 aaKnown RBP17.42■□□□□ 0.38
DDR1-278ENST00000515233 HOXC8P31273 242 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
DDR1-278ENST00000515233 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 IL31RAQ8NI17 732 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 TUT1Q9H6E5 874 aaKnown RBP17.42■□□□□ 0.38
DDR1-278ENST00000515233 INSL6Q9Y581 213 aa17.42■□□□□ 0.38
DDR1-278ENST00000515233 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
DDR1-278ENST00000515233 RSPH10B2B2RC85 870 aa17.41■□□□□ 0.38
DDR1-278ENST00000515233 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
DDR1-278ENST00000515233 STAM2O75886 525 aa17.41■□□□□ 0.38
DDR1-278ENST00000515233 RSPH10BP0C881 870 aa17.41■□□□□ 0.38
DDR1-278ENST00000515233 ICAM3P32942 547 aa17.41■□□□□ 0.38
DDR1-278ENST00000515233 TROAPQ12815 778 aa17.41■□□□□ 0.38
DDR1-278ENST00000515233 FCHSD1Q86WN1 690 aa17.41■□□□□ 0.38
DDR1-278ENST00000515233 DBF4BQ8NFT6 615 aa17.41■□□□□ 0.38
DDR1-278ENST00000515233 GPKOWQ92917 476 aaPredicted RBP eCLIP17.41■□□□□ 0.38
DDR1-278ENST00000515233 COL4A4P53420 1690 aaPredicted RBP17.41■□□□□ 0.38
DDR1-278ENST00000515233 ERICH2A1L162 156 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 C17orf102A2RUQ5 167 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 SORBS3O60504 671 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 HTRA4P83105 476 aaPredicted RBP17.4■□□□□ 0.38
DDR1-278ENST00000515233 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.4■□□□□ 0.38
DDR1-278ENST00000515233 GDPD5Q8WTR4 605 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 ATP6V0A1Q93050 837 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 ZFP91Q96JP5 570 aaPredicted RBP17.4■□□□□ 0.38
DDR1-278ENST00000515233 INPP4AQ96PE3 977 aaPredicted RBP17.4■□□□□ 0.38
DDR1-278ENST00000515233 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 RNPEPQ9H4A4 650 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 FRMPD4Q14CM0 1322 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 SIP14410 1827 aa17.4■□□□□ 0.38
DDR1-278ENST00000515233 BAZ2BQ9UIF8 2168 aaKnown RBP17.39■□□□□ 0.37
DDR1-278ENST00000515233 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.39■□□□□ 0.37
DDR1-278ENST00000515233 CAND2O75155 1236 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 AMHP03971 560 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
DDR1-278ENST00000515233 THPOP40225 353 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 MRPS9P82933 396 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 512.6 ms