RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 MARCH10Q8NA82 808 aaPredicted RBP5.23□□□□□ -1.57
CAST-242ENST00000515063 TMEM145Q8NBT3 493 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 DPF3Q92784 378 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 DDX11Q96FC9 970 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 CHAMP1Q96JM3 812 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 RXFP1Q9HBX9 757 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 EPB41L4AQ9HCS5 686 aaPredicted RBP5.23□□□□□ -1.57
CAST-242ENST00000515063 LUC7LQ9NQ29 371 aaKnown RBP5.23□□□□□ -1.57
CAST-242ENST00000515063 FBLN5Q9UBX5 448 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 X6R8D5 127 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 MRC2Q9UBG0 1479 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 ADAMTS12P58397 1594 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 LRRIQ1Q96JM4 1722 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 HECW1Q76N89 1606 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 FGD6Q6ZV73 1430 aa5.23□□□□□ -1.57
CAST-242ENST00000515063 IQGAP2Q13576 1575 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 IFT140Q96RY7 1462 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 A0A1W2PQU0 124 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 MAFKO60675 156 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 CYP2C8P10632 490 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 ATF2P15336 505 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 BCL6P41182 706 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 SLC35F1Q5T1Q4 408 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 ERICH6BQ5W0A0 696 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 CCDC103Q8IW40 242 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 KREMEN2Q8NCW0 462 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 ARMC5Q96C12 935 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 KCNC2Q96PR1 638 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 YIPF4Q9BSR8 244 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 AARSD1Q9BTE6 412 aaKnown RBP5.22□□□□□ -1.57
CAST-242ENST00000515063 IER2Q9BTL4 223 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 HIRIP3Q9BW71 556 aaPredicted RBP5.22□□□□□ -1.57
CAST-242ENST00000515063 PCDHA2Q9Y5H9 948 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 UGGT2Q9NYU1 1516 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 AKNAQ7Z591 1439 aa5.22□□□□□ -1.57
CAST-242ENST00000515063 TCOF1Q13428 1488 aaKnown RBP5.21□□□□□ -1.58
CAST-242ENST00000515063 MTUS2Q5JR59 1369 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 TRAV20A0A0B4J274 112 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 TRIM13O60858 407 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 DGKIO75912 1065 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 FGFR1P11362 822 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 FPR2P25090 351 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 CTSWP56202 376 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 CYP4F3Q08477 520 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 PRSS53Q2L4Q9 553 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 RSPO2Q6UXX9 243 aaPredicted RBP5.21□□□□□ -1.58
CAST-242ENST00000515063 FNIP1Q8TF40 1166 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 EPB41L1Q9H4G0 881 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 GPR27Q9NS67 375 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 ZNF652Q9Y2D9 606 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 NPFFR2Q9Y5X5 522 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 WDR62O43379 1518 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 MYOM3Q5VTT5 1437 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 MIA2Q96PC5 1412 aa5.21□□□□□ -1.58
CAST-242ENST00000515063 TDRD9Q8NDG6 1382 aaKnown RBP5.2□□□□□ -1.58
CAST-242ENST00000515063 HGSO14964 777 aaPredicted RBP5.2□□□□□ -1.58
CAST-242ENST00000515063 SMARCA5O60264 1052 aaPredicted RBP5.2□□□□□ -1.58
CAST-242ENST00000515063 HTRA3P83110 453 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 SF3A1Q15459 793 aaKnown RBP5.2□□□□□ -1.58
CAST-242ENST00000515063 SF1Q15637 639 aaKnown RBP5.2□□□□□ -1.58
CAST-242ENST00000515063 LILRA6Q6PI73 481 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 TTLL7Q6ZT98 887 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 MILR1Q7Z6M3 343 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 SAPCD2Q86UD0 394 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 MIB1Q86YT6 1006 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 RCBTB1Q8NDN9 531 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 SMARCC2Q8TAQ2 1214 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 DCAF4Q8WV16 495 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 C1orf159Q96HA4 380 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 IPO9Q96P70 1041 aaKnown RBP5.2□□□□□ -1.58
CAST-242ENST00000515063 ZFYVE21Q9BQ24 234 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 CLDND1Q9NY35 253 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 NTMQ9P121 344 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 TMEFF2Q9UIK5 374 aaPredicted RBP5.2□□□□□ -1.58
CAST-242ENST00000515063 PALD1Q9ULE6 856 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 SIT1Q9Y3P8 196 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 NUB1Q9Y5A7 615 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 GCC2Q8IWJ2 1684 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 HFM1A2PYH4 1435 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 NCOA2Q15596 1464 aa5.2□□□□□ -1.58
CAST-242ENST00000515063 PTPN23Q9H3S7 1636 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 SH3D21A4FU49 640 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 KRIT1O00522 736 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 PDPK1O15530 556 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 SGSM2O43147 1006 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 CAPNS1P04632 268 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 HOXA5P20719 270 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 MC3RP41968 323 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 KCNC1P48547 511 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 IFRD2Q12894 506 aaPredicted RBP5.19□□□□□ -1.58
CAST-242ENST00000515063 SOGA3Q5TF21 947 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 STEAP3Q658P3 488 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 NSMFQ6X4W1 530 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 NLRP10Q86W26 655 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 FAM126BQ8IXS8 530 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 PHOSPHO1Q8TCT1 267 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 PHF20Q9BVI0 1012 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 BCAS3Q9H6U6 928 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 SIRPGQ9P1W8 387 aa5.19□□□□□ -1.58
CAST-242ENST00000515063 UACAQ9BZF9 1416 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms