RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 INPP4AQ96PE3 977 aaPredicted RBP28.16■■■□□ 2.1
SNF8-213ENST00000514929 IL23AQ9NPF7 189 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 LAMA2P24043 3122 aaKnown RBP28.16■■■□□ 2.1
SNF8-213ENST00000514929 RPS6KB1P23443 525 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 METAP2P50579 478 aaKnown RBP eCLIP28.15■■■□□ 2.1
SNF8-213ENST00000514929 SMAD3P84022 425 aaKnown RBP28.15■■■□□ 2.1
SNF8-213ENST00000514929 FUT2Q10981 343 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 UBE2SQ16763 222 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 HSDL1Q3SXM5 330 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 TMEM240Q5SV17 173 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 XRRA1Q6P2D8 792 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 KATNAL1Q9BW62 490 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 WNT8AQ9H1J5 351 aa28.15■■■□□ 2.1
SNF8-213ENST00000514929 V9GY48 417 aaPredicted RBP28.15■■■□□ 2.1
SNF8-213ENST00000514929 SPDYE3A6NKU9 549 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 FIBPO43427 364 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 EPB41L2O43491 1005 aaKnown RBP28.14■■■□□ 2.1
SNF8-213ENST00000514929 PPFIA4O75335 1185 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 ZNF286BP0CG31 522 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 CDC27P30260 824 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 ICAM3P32942 547 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 NAPAP54920 295 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 WWC2Q6AWC2 1192 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 FAM109BQ6ICB4 259 aaPredicted RBP28.14■■■□□ 2.1
SNF8-213ENST00000514929 ZNF365Q70YC5 407 aa28.14■■■□□ 2.1
SNF8-213ENST00000514929 CCDC196A0A1B0GTZ2 297 aa28.13■■■□□ 2.09
SNF8-213ENST00000514929 SPATA31C2B4DYI2 1134 aa28.13■■■□□ 2.09
SNF8-213ENST00000514929 PSEN2P49810 448 aa28.13■■■□□ 2.09
SNF8-213ENST00000514929 ALG1Q9BT22 464 aa28.13■■■□□ 2.09
SNF8-213ENST00000514929 FAM217BQ9NTX9 383 aaPredicted RBP28.13■■■□□ 2.09
SNF8-213ENST00000514929 F2P00734 622 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 NEDD9Q14511 834 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 MFSD10Q14728 455 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 PTGISQ16647 500 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 ZNF697Q5TEC3 545 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 PPP1R18Q6NYC8 613 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 NLRX1Q86UT6 975 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 SESTD1Q86VW0 696 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 C7orf31Q8N865 590 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 SCLYQ96I15 445 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 MTMR10Q9NXD2 777 aa28.12■■■□□ 2.09
SNF8-213ENST00000514929 NOP56O00567 594 aaKnown RBP28.11■■■□□ 2.09
SNF8-213ENST00000514929 FGBP02675 491 aa28.11■■■□□ 2.09
SNF8-213ENST00000514929 HOXD8P13378 290 aaPredicted RBP28.11■■■□□ 2.09
SNF8-213ENST00000514929 ADD1P35611 737 aaKnown RBP28.11■■■□□ 2.09
SNF8-213ENST00000514929 KIAA0753Q2KHM9 967 aa28.11■■■□□ 2.09
SNF8-213ENST00000514929 GDF6Q6KF10 455 aaPredicted RBP28.11■■■□□ 2.09
SNF8-213ENST00000514929 RPUSD2Q8IZ73 545 aaKnown RBP28.11■■■□□ 2.09
SNF8-213ENST00000514929 EHMT1Q9H9B1 1298 aa28.11■■■□□ 2.09
SNF8-213ENST00000514929 PCDHA6Q9UN73 950 aa28.11■■■□□ 2.09
SNF8-213ENST00000514929 PCDHA8Q9Y5H6 950 aa28.11■■■□□ 2.09
SNF8-213ENST00000514929 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.1■■■□□ 2.09
SNF8-213ENST00000514929 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.1■■■□□ 2.09
SNF8-213ENST00000514929 hCG_1984214I3L0E3 225 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 SEMA3FQ13275 785 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 BFSP2Q13515 415 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 CYFIP1Q7L576 1253 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 FBXL16Q8N461 479 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 ZNF713Q8N859 430 aaPredicted RBP28.1■■■□□ 2.09
SNF8-213ENST00000514929 RETREG2Q8NC44 543 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 FAM161BQ96MY7 647 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 MTIF3Q9H2K0 278 aaKnown RBP28.1■■■□□ 2.09
SNF8-213ENST00000514929 BCAS3Q9H6U6 928 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 HDAC6Q9UBN7 1215 aa28.1■■■□□ 2.09
SNF8-213ENST00000514929 TYW1BQ6NUM6 668 aa28.09■■■□□ 2.09
SNF8-213ENST00000514929 METTL7BQ6UX53 244 aa28.09■■■□□ 2.09
SNF8-213ENST00000514929 USP26Q9BXU7 913 aa28.09■■■□□ 2.09
SNF8-213ENST00000514929 AGXT2Q9BYV1 514 aa28.09■■■□□ 2.09
SNF8-213ENST00000514929 RIC8AQ9NPQ8 531 aa28.09■■■□□ 2.09
SNF8-213ENST00000514929 GTF2IRD1Q9UHL9 959 aa28.09■■■□□ 2.09
SNF8-213ENST00000514929 STXBP3O00186 592 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 HAS3O00219 553 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 PITPNM1O00562 1244 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 ADCY7P51828 1080 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 CCDC155Q8N6L0 562 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 HERVK_113Q902F9 699 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 GPRASP2Q96D09 838 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 BARHL2Q9NY43 387 aa28.08■■■□□ 2.09
SNF8-213ENST00000514929 SMCO2A6NFE2 343 aa28.07■■■□□ 2.08
SNF8-213ENST00000514929 RASIP1Q5U651 963 aa28.07■■■□□ 2.08
SNF8-213ENST00000514929 RUFY3Q7L099 469 aa28.07■■■□□ 2.08
SNF8-213ENST00000514929 OTOP2Q7RTS6 562 aa28.07■■■□□ 2.08
SNF8-213ENST00000514929 TEX2Q8IWB9 1127 aa28.07■■■□□ 2.08
SNF8-213ENST00000514929 GIMAP8Q8ND71 665 aaPredicted RBP28.07■■■□□ 2.08
SNF8-213ENST00000514929 CDHR1Q96JP9 859 aa28.07■■■□□ 2.08
SNF8-213ENST00000514929 SENP7Q9BQF6 1050 aa28.07■■■□□ 2.08
SNF8-213ENST00000514929 DEFB128Q7Z7B8 93 aa28.06■■■□□ 2.08
SNF8-213ENST00000514929 C16orf70Q9BSU1 422 aa28.06■■■□□ 2.08
SNF8-213ENST00000514929 GLT8D2Q9H1C3 349 aa28.06■■■□□ 2.08
SNF8-213ENST00000514929 ZSWIM6Q9HCJ5 1215 aa28.06■■■□□ 2.08
SNF8-213ENST00000514929 CYP46A1Q9Y6A2 500 aa28.06■■■□□ 2.08
SNF8-213ENST00000514929 NID2Q14112 1375 aa28.06■■■□□ 2.08
SNF8-213ENST00000514929 FOSP01100 380 aaPredicted RBP28.05■■■□□ 2.08
SNF8-213ENST00000514929 LGALS2P05162 132 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 PFKMP08237 780 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 IQCF3P0C7M6 154 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 ITGB5P18084 799 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 RFC2P35250 354 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 SP4Q02446 784 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 PFKFB3Q16875 520 aaPredicted RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms