RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 SVIPQ8NHG7 77 aa9.97□□□□□ -0.81
LDHBP3-201ENST00000514909 MKNK2Q9HBH9 465 aa9.97□□□□□ -0.81
LDHBP3-201ENST00000514909 ADGRE2Q9UHX3 823 aa9.97□□□□□ -0.81
LDHBP3-201ENST00000514909 TCFL5Q9UL49 500 aa9.97□□□□□ -0.81
LDHBP3-201ENST00000514909 CBLCQ9ULV8 474 aa9.97□□□□□ -0.81
LDHBP3-201ENST00000514909 TIMM13Q9Y5L4 95 aaPredicted RBP9.97□□□□□ -0.81
LDHBP3-201ENST00000514909 FAM155AB1AL88 458 aaPredicted RBP9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 MT-CO1P00395 513 aa9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 VCAM1P19320 739 aa9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 GAB4Q2WGN9 574 aa9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 MINDY4Q4G0A6 757 aa9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 PPP4R4Q6NUP7 873 aa9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 CISD2Q8N5K1 135 aaKnown RBP9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 FAXDC2Q96IV6 333 aa9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 SPO11Q9Y5K1 396 aa9.96□□□□□ -0.82
LDHBP3-201ENST00000514909 H7C1D1 291 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 TBC1D8O95759 1140 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 CYP2C19P33261 490 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 RPL11P62913 178 aaKnown RBP9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 TCIRG1Q13488 830 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 GTF2H3Q13889 308 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 BRD3Q15059 726 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 TERF2Q15554 542 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 LONRF3Q496Y0 759 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 SYCP2LQ5T4T6 812 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 BROXQ5VW32 411 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 ALYREFQ86V81 257 aaKnown RBP9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 Q8N1Y9 231 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 TBC1D32Q96NH3 1257 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 AIFM3Q96NN9 605 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 CATSPERZQ9NTU4 200 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 C14orf119Q9NWQ9 140 aa9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 PPARGC1AQ9UBK2 798 aaKnown RBP9.95□□□□□ -0.82
LDHBP3-201ENST00000514909 VSTM5A8MXK1 200 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 H7BY64 318 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 PF4V1P10720 104 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 PCBP2Q15366 365 aaKnown RBP eCLIP9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 HHIPL2Q6UWX4 724 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 RASSF3Q86WH2 238 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 TPH2Q8IWU9 490 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 CMTR2Q8IYT2 770 aaKnown RBP9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 FOXP3Q9BZS1 431 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 AP5S1Q9NUS5 200 aa9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 H2AFY2Q9P0M6 372 aaPredicted RBP9.94□□□□□ -0.82
LDHBP3-201ENST00000514909 SSU72P8A0A1W2PR75 194 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 ERC2O15083 957 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 TRIM27P14373 513 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 LSP1P33241 339 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 ADMP35318 185 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 GBX1Q14549 363 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 GPR19Q15760 415 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 KSR2Q6VAB6 950 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 FBXL7Q9UJT9 491 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 ZNF652Q9Y2D9 606 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 MRFAP1Q9Y605 127 aa9.93□□□□□ -0.82
LDHBP3-201ENST00000514909 C7orf72A4D263 438 aa9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 ZBTB48P10074 688 aaPredicted RBP9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 CLCN7P51798 805 aa9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 OXCT1P55809 520 aa9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 NKPD1Q17RQ9 610 aa9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 HABP4Q5JVS0 413 aaKnown RBP9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 TSHZ1Q6ZSZ6 1077 aa9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 PNMA8AQ86V59 439 aaPredicted RBP9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 ZNF610Q8N9Z0 462 aa9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 MPHOSPH6Q99547 160 aaKnown RBP9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 SSBP4Q9BWG4 385 aaPredicted RBP9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 SMURF1Q9HCE7 757 aa9.92□□□□□ -0.82
LDHBP3-201ENST00000514909 NPHS1O60500 1241 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 LTFP02788 710 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 PDE6AP16499 860 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 LPOP22079 712 aaPredicted RBP9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 BCL6P41182 706 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 SMAD3P84022 425 aaKnown RBP9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 LAPTM5Q13571 262 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 LRRC32Q14392 662 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 ZNF174Q15697 407 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 SMAD2Q15796 467 aaKnown RBP9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 CPNE8Q86YQ8 564 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 USP33Q8TEY7 942 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 CDADC1Q9BWV3 514 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 MKS1Q9NXB0 559 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 CLDND1Q9NY35 253 aa9.91□□□□□ -0.82
LDHBP3-201ENST00000514909 IRF9Q00978 393 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 PGM2L1Q6PCE3 622 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 ZNF765Q7L2R6 523 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 EPM2AIP1Q7L775 607 aaPredicted RBP9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 TMPRSS7Q7RTY8 843 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 NLRP10Q86W26 655 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 SPACA3Q8IXA5 215 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 NAT16Q8N8M0 369 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 CLIP3Q96DZ5 547 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 HSPBAP1Q96EW2 488 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 SARGQ9BW04 601 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
LDHBP3-201ENST00000514909 TMEM82A0PJX8 343 aa9.89□□□□□ -0.83
LDHBP3-201ENST00000514909 CREB3O43889 395 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms