RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 GDF6Q6KF10 455 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-229ENST00000513988 TAPT1Q6NXT6 567 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 TMEM179Q6ZVK1 233 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLDND1-229ENST00000513988 CPXCR1Q8N123 301 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 BORCS6Q96GS4 357 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 CTAGE1Q96RT6 745 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 PLVAPQ9BX97 442 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 PLAGL2Q9UPG8 496 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 CTDP1Q9Y5B0 961 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-229ENST00000513988 EMSYQ7Z589 1322 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 RAD50Q92878 1312 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 LOC400499M0QZD8 3231 aa9.25□□□□□ -0.93
CLDND1-229ENST00000513988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.24□□□□□ -0.93
CLDND1-229ENST00000513988 FSD2A1L4K1 749 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 TMEM8BA6NDV4 472 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 RAD21O60216 631 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 CIAO1O76071 339 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 SRGAP2BP0DMP2 458 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 TIMM10P62072 90 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 LSM11P83369 360 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLDND1-229ENST00000513988 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
CLDND1-229ENST00000513988 ICA1Q05084 483 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 TBC1D8BQ0IIM8 1120 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 MBTPS1Q14703 1052 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 WDR43Q15061 677 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLDND1-229ENST00000513988 ZNF618Q5T7W0 954 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 CLEC10AQ8IUN9 316 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 OR6J1Q8NGC5 347 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 APOL5Q9BWW9 433 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 S1PR5Q9H228 398 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 GPR108Q9NPR9 543 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 LIMD1Q9UGP4 676 aa9.24□□□□□ -0.93
CLDND1-229ENST00000513988 SMG5Q9UPR3 1016 aaKnown RBP9.24□□□□□ -0.93
CLDND1-229ENST00000513988 DDX49Q9Y6V7 483 aaKnown RBP9.24□□□□□ -0.93
CLDND1-229ENST00000513988 COL4A3Q01955 1670 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 CACNA1IQ9P0X4 2223 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 LINC00271P0C7V0 271 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 TGM1P22735 817 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 DNAJB1P25685 340 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 SPECC1Q5M775 1068 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 FAM83BQ5T0W9 1011 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 ADGRA1Q86SQ6 560 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 C1orf210Q8IVY1 113 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 CHST13Q8NET6 341 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 VN1R2Q8NFZ6 395 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 ATP8B4Q8TF62 1192 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 CLP1Q92989 425 aaKnown RBP9.23□□□□□ -0.93
CLDND1-229ENST00000513988 RNF166Q96A37 237 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-229ENST00000513988 SLF1Q9BQI6 1058 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 PARD6AQ9NPB6 346 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 GMEB2Q9UKD1 530 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 ADGRA3Q8IWK6 1321 aa9.23□□□□□ -0.93
CLDND1-229ENST00000513988 DMXL2Q8TDJ6 3036 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 EIF4E1BA6NMX2 242 aaKnown RBP9.22□□□□□ -0.93
CLDND1-229ENST00000513988 ATP2A1O14983 1001 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 PER2O15055 1255 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 ZBED4O75132 1171 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 IL15P40933 162 aaPredicted RBP9.22□□□□□ -0.93
CLDND1-229ENST00000513988 TECP42680 631 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 PLCD1P51178 756 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 DYNLL1P63167 89 aaKnown RBP9.22□□□□□ -0.93
CLDND1-229ENST00000513988 ANKRD54Q6NXT1 300 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 SIAH1Q8IUQ4 282 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 ZDHHC14Q8IZN3 488 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 TDRD5Q8NAT2 981 aaKnown RBP9.22□□□□□ -0.93
CLDND1-229ENST00000513988 SEPT8Q92599 483 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 P2RX5Q93086 422 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 XAGE2Q96GT9 111 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 WDR11Q9BZH6 1224 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 RAVER2Q9HCJ3 691 aaKnown RBP9.22□□□□□ -0.93
CLDND1-229ENST00000513988 GOPCQ9HD26 462 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 HOMER2Q9NSB8 354 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 COG6Q9Y2V7 657 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.22□□□□□ -0.93
CLDND1-229ENST00000513988 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
CLDND1-229ENST00000513988 ITGB1P05556 798 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 PTK7Q13308 1070 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 NAALADL2Q58DX5 795 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 PLEKHG4Q58EX7 1191 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 PPP1R15BQ5SWA1 713 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 GORABQ5T7V8 394 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 SESTD1Q86VW0 696 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 SPPL3Q8TCT6 385 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 MICAL1Q8TDZ2 1067 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 POF1BQ8WVV4 589 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 ATRIPQ8WXE1 791 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 NECTIN4Q96NY8 510 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 CDCA3Q99618 268 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-229ENST00000513988 POMKQ9H5K3 350 aa9.21□□□□□ -0.94
CLDND1-229ENST00000513988 RYDENQ9NUL5 291 aaKnown RBP9.21□□□□□ -0.94
CLDND1-229ENST00000513988 TENM4Q6N022 2769 aa9.2□□□□□ -0.94
CLDND1-229ENST00000513988 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.2□□□□□ -0.94
CLDND1-229ENST00000513988 A6NJR5 290 aa9.2□□□□□ -0.94
CLDND1-229ENST00000513988 APAF1O14727 1248 aa9.2□□□□□ -0.94
CLDND1-229ENST00000513988 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
CLDND1-229ENST00000513988 DCNP07585 359 aaKnown RBP9.2□□□□□ -0.94
CLDND1-229ENST00000513988 MMP3P08254 477 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms