RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ABCC6O95255 1503 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 PLCG1P19174 1290 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 LIG3P49916 1009 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 RAB3GAP1Q15042 981 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 TARBP2Q15633 366 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 HSF5Q4G112 596 aaPredicted RBP5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 DIEXFQ68CQ4 756 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 SAPCD2Q86UD0 394 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 TCTN2Q96GX1 697 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 FOXP3Q9BZS1 431 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 USP40Q9NVE5 1235 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 ACSL6Q9UKU0 697 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 RGPD5Q99666 1765 aa5.27□□□□□ -1.57
PDLIM5-218ENST00000513341 IGSF1Q8N6C5 1336 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 LY75O60449 1722 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 CPSF1Q10570 1443 aaKnown RBP5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 MSL3P1P0C860 447 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 RLBP1P12271 317 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 TNNI2P48788 182 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 MAPKAPK2P49137 400 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 TGFB2P61812 414 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 HTRA3P83110 453 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 NR1I3Q14994 352 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 CCDC85BQ15834 202 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 BBS9Q3SYG4 887 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 SAMD11Q96NU1 681 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 CCNL1Q9UK58 526 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 TAF6LQ9Y6J9 622 aa5.26□□□□□ -1.57
PDLIM5-218ENST00000513341 TTC21AQ8NDW8 1320 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 KDM2BQ8NHM5 1336 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 PCNTO95613 3336 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 C10orf71Q711Q0 1435 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 A0A1W2PQ45 241 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 A0A1W2PQY0 241 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 FSHBP01225 129 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 HSPA1AP0DMV8 641 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 HSPA1BP0DMV9 641 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 TFE3P19532 575 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 FBLN1P23142 703 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 MAPK8P45983 427 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 HMGA2P52926 109 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 ATP2B2Q01814 1243 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 SLCO6A1Q86UG4 719 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 SMC1BQ8NDV3 1235 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 FNIP1Q8TF40 1166 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 EAF1Q96JC9 268 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 MENTQ9BUN1 341 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 CORINQ9Y5Q5 1042 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 ANKRD36BQ8N2N9 1353 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 TUBGCP6Q96RT7 1819 aa5.25□□□□□ -1.57
PDLIM5-218ENST00000513341 CICQ96RK0 1608 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 SSU72P8A0A1W2PR75 194 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 CYR61O00622 381 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 NOBOXO60393 691 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 MAPK1P28482 360 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 RNF4P78317 190 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 CYP4F8P98187 520 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 PLEKHN1Q494U1 663 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 RPTNQ6XPR3 784 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 FERMT3Q86UX7 667 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 SETDB2Q96T68 719 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 PLEKHG2Q9H7P9 1386 aa5.24□□□□□ -1.57
PDLIM5-218ENST00000513341 TTC21BQ7Z4L5 1316 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 RGS19P49795 217 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 NCKAP1LP55160 1127 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 ZC3H14Q6PJT7 736 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 LNPKQ9C0E8 428 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 SLITRK6Q9H5Y7 841 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 SUSD2Q9UGT4 822 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 GNEQ9Y223 722 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 USP47Q96K76 1375 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 NSD3Q9BZ95 1437 aa5.23□□□□□ -1.57
PDLIM5-218ENST00000513341 PIK3C2AO00443 1686 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 PXDNLA1KZ92 1463 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 USP31Q70CQ4 1352 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 NUDT19A8MXV4 375 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 PLA2G1BP04054 148 aaKnown RBP5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 ZNF20P17024 532 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 PRKCAP17252 672 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 LIMS1P48059 325 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 ZSCAN29Q8IWY8 852 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 RETREG2Q8NC44 543 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 ZCRB1Q8TBF4 217 aaKnown RBP5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 SMARCC1Q92922 1105 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 SPATA25Q9BR10 227 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 RNF38Q9H0F5 515 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 DUSP10Q9Y6W6 482 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 CGNL1Q0VF96 1302 aa5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 CENPJQ9HC77 1338 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-218ENST00000513341 FAM221AA4D161 298 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 RGS13O14921 159 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 SRGAP3O43295 1099 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 SYPP08247 313 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 PDIA4P13667 645 aaKnown RBP5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 VEGFAP15692 232 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 TACR2P21452 398 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 EIF4BP23588 611 aaKnown RBP5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 CNR2P34972 360 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms