RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 FOXP1Q9H334 677 aaPredicted RBP8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 TMEM260Q9NX78 707 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 FLRT1Q9NZU1 646 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 CCDC194A0A1B0GVG4 234 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 VPS37CA5D8V6 355 aaPredicted RBP8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 BTBD18B2RXH4 712 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 STAM2O75886 525 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 IGHA2P01877 340 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 NR3C2P08235 984 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 ELNP15502 786 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 SYT1P21579 422 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 CCND2P30279 289 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 MLLT3P42568 568 aaPredicted RBP8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 ARHGAP4P98171 946 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 PDE4DQ08499 809 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 NR5A1Q13285 461 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 NONOQ15233 471 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 STXBP2Q15833 593 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 SLC9C1Q4G0N8 1177 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 CRYGNQ8WXF5 182 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 DDX12PQ92771 950 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 TNFRSF25Q93038 417 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 PGBD1Q96JS3 809 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 ABHD16BQ9H3Z7 469 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 VTA1Q9NP79 307 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 DAXXQ9UER7 740 aaPredicted RBP8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 NRBP1Q9UHY1 535 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 CNPY2Q9Y2B0 182 aa8.65□□□□□ -1.02
HMGXB3-204ENST00000513318 TRIP12Q14669 1992 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 ARID2Q68CP9 1835 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 ADAMTS3O15072 1205 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 STX6O43752 255 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 INHAP05111 366 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 CYP3A4P08684 503 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 MYCLP12524 364 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 CYBAP13498 195 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 U2AF2P26368 475 aaKnown RBP eCLIP8.64□□□□□ -1.034e-6■■■■□ 21.1
HMGXB3-204ENST00000513318 CYP2C19P33261 490 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 UBXN2AP68543 259 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 GNPTABQ3T906 1256 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 MOXD1Q6UVY6 613 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 PIK3AP1Q6ZUJ8 805 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 VSIG10LQ86VR7 867 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 NOSTRINQ8IVI9 506 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 IL31RAQ8NI17 732 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 TBCKQ8TEA7 893 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 PCDHGA10Q9Y5H3 936 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 MYH11P35749 1972 aa8.64□□□□□ -1.03
HMGXB3-204ENST00000513318 EVPLQ92817 2033 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 SCN10AQ9Y5Y9 1956 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 KIF28PB7ZC32 967 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 EIF3JO75822 258 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 SNAI1O95863 264 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 USP11P51784 963 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 MRPS9P82933 396 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 SETQ01105 290 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 ACVR2BQ13705 512 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 INF2Q27J81 1249 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 MAP3K21Q5TCX8 1036 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 EEPD1Q7L9B9 569 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 BRAPQ7Z569 592 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 NEK8Q86SG6 692 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 FBXO16Q8IX29 292 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 INPP4AQ96PE3 977 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 NAP1L4Q99733 375 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 KATNBL1Q9H079 304 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 ZHX1Q9UKY1 873 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 NOL7Q9UMY1 257 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 MTMR6Q9Y217 621 aa8.63□□□□□ -1.03
HMGXB3-204ENST00000513318 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 MAFGO15525 162 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 FIBPO43427 364 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 MSCO60682 206 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 ZNF865P0CJ78 1059 aaPredicted RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 AKR1A1P14550 325 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 GCFC2P16383 781 aaKnown RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 CIITAP33076 1130 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 ZNF76P36508 570 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 TRAPPC10P48553 1259 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 CACNB2Q08289 660 aaPredicted RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 TRIM32Q13049 653 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 ORC2Q13416 577 aaPredicted RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 TTLL4Q14679 1199 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 CEP55Q53EZ4 464 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 RILPL1Q5EBL4 403 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 EARS2Q5JPH6 523 aaKnown RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 KCNV1Q6PIU1 500 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 NIPA1Q7RTP0 329 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 NLRX1Q86UT6 975 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 SH3TC2Q8TF17 1288 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 SCFD2Q8WU76 684 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 ARMC5Q96C12 935 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 GPRASP2Q96D09 838 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 CDHR1Q96JP9 859 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms