RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 STXBP2Q15833 593 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 EPC2Q52LR7 807 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.32■□□□□ 0.27e-6■□□□□ 8.4
SPCS3-204ENST00000513139 SEPT14Q6ZU15 432 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 BANK1Q8NDB2 785 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 PI4K2BQ8TCG2 481 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 TECTAO75443 2155 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 KAT6AQ92794 2004 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 NCK2O43639 380 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 LAMC2Q13753 1193 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 MFSD10Q14728 455 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 KIAA0753Q2KHM9 967 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 GPATCH4Q5T3I0 446 aaKnown RBP16.31■□□□□ 0.2
SPCS3-204ENST00000513139 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 ADHFE1Q8IWW8 467 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 PPTC7Q8NI37 304 aa16.31■□□□□ 0.2
SPCS3-204ENST00000513139 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
SPCS3-204ENST00000513139 CFAP54Q96N23 3096 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 HOXD8P13378 290 aaPredicted RBP16.3■□□□□ 0.2
SPCS3-204ENST00000513139 USH1GQ495M9 461 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 PLEKHG4Q58EX7 1191 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 DBF4BQ8NFT6 615 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 SNX27Q96L92 541 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 MFSD14AQ96MC6 490 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 NSUN3Q9H649 340 aaKnown RBP16.3■□□□□ 0.2
SPCS3-204ENST00000513139 TOMM22Q9NS69 142 aa16.3■□□□□ 0.2
SPCS3-204ENST00000513139 ABCB11O95342 1321 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 RSPH10B2B2RC85 870 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 PPFIA4O75335 1185 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 RSPH10BP0C881 870 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 GPM6BQ13491 265 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 TCEAL5Q5H9L2 206 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 HFE2Q6ZVN8 426 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 SERINC5Q86VE9 423 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 SYTL5Q8TDW5 730 aaPredicted RBP16.29■□□□□ 0.2
SPCS3-204ENST00000513139 WNT8BQ93098 351 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 TOP1MTQ969P6 601 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
SPCS3-204ENST00000513139 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
SPCS3-204ENST00000513139 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
SPCS3-204ENST00000513139 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
SPCS3-204ENST00000513139 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
SPCS3-204ENST00000513139 VPS53Q5VIR6 699 aa16.28■□□□□ 0.2
SPCS3-204ENST00000513139 DHX37Q8IY37 1157 aaKnown RBP16.28■□□□□ 0.2
SPCS3-204ENST00000513139 TMEM192Q8IY95 271 aa16.28■□□□□ 0.2
SPCS3-204ENST00000513139 YME1L1Q96TA2 773 aa16.28■□□□□ 0.2
SPCS3-204ENST00000513139 POP1Q99575 1024 aaKnown RBP16.28■□□□□ 0.2
SPCS3-204ENST00000513139 COL20A1Q9P218 1284 aa16.28■□□□□ 0.2
SPCS3-204ENST00000513139 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 ZDBF2Q9HCK1 2354 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 FGAP02671 866 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 ZNF286BP0CG31 522 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 IRS1P35568 1242 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 ZNF200P98182 395 aaPredicted RBP16.27■□□□□ 0.2
SPCS3-204ENST00000513139 SMAD2Q15796 467 aaKnown RBP16.27■□□□□ 0.2
SPCS3-204ENST00000513139 CTC1Q2NKJ3 1217 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 HERC4Q5GLZ8 1057 aaPredicted RBP16.27■□□□□ 0.2
SPCS3-204ENST00000513139 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
SPCS3-204ENST00000513139 KCNV1Q6PIU1 500 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 FBXO11Q86XK2 927 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.2
SPCS3-204ENST00000513139 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
SPCS3-204ENST00000513139 CAND2O75155 1236 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 LTBRP36941 435 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 THPOP40225 353 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 HIC1Q14526 733 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 SEPT8Q92599 483 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 CLDND1Q9NY35 253 aa16.26■□□□□ 0.19
SPCS3-204ENST00000513139 CACNA1HO95180 2353 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 C5orf67F2Z3F1 127 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 RB1P06400 928 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 NR3C2P08235 984 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 HOXC8P31273 242 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 CDC37Q16543 378 aaPredicted RBP16.25■□□□□ 0.19
SPCS3-204ENST00000513139 BMP8AQ7Z5Y6 402 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 LMAN2LQ9H0V9 348 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 PXMP2Q9NR77 195 aa16.25■□□□□ 0.19
SPCS3-204ENST00000513139 MRPL11Q9Y3B7 192 aaKnown RBP16.25■□□□□ 0.19
SPCS3-204ENST00000513139 TTC3P53804 2025 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 GOLGA8HP0CJ92 632 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 TGFB3P10600 412 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 HSPD1P10809 573 aaKnown RBP16.24■□□□□ 0.19
SPCS3-204ENST00000513139 MX1P20591 662 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 NT5C2P49902 561 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 GSE1Q14687 1217 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 CELF3Q5SZQ8 465 aaKnown RBP16.24■□□□□ 0.19
SPCS3-204ENST00000513139 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 RPAINQ86UA6 219 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 DGKHQ86XP1 1220 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms