RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 C11orf74Q86VG3 221 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 FAM9AQ8IZU1 332 aaPredicted RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 IGSF22Q8N9C0 903 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 DDX1Q92499 740 aaKnown RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 DDX11Q96FC9 970 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 ASIC4Q96FT7 647 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 PUS7Q96PZ0 661 aaKnown RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 SLC6A17Q9H1V8 727 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 TRIM39Q9HCM9 518 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 MBNL3Q9NUK0 354 aaKnown RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 NOP58Q9Y2X3 529 aaKnown RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 MSCO60682 206 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 HIP1RO75146 1068 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 PYGMP11217 842 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 PNLIPP16233 465 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 FPR2P25090 351 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 TRHRP34981 398 aaPredicted RBP5.77□□□□□ -1.49
HTT-210ENST00000512909 IL2P60568 153 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 OCRLQ01968 901 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 CYP4F3Q08477 520 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 ARTNQ5T4W7 220 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 MPZL3Q6UWV2 235 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 KRT26Q7Z3Y9 468 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 PASD1Q8IV76 773 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 CISD2Q8N5K1 135 aaKnown RBP5.77□□□□□ -1.49
HTT-210ENST00000512909 NLGN2Q8NFZ4 835 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 PEX11GQ96HA9 241 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 G6PC3Q9BUM1 346 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 TARS2Q9BW92 718 aaKnown RBP5.77□□□□□ -1.49
HTT-210ENST00000512909 JAM3Q9BX67 310 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 CRTAC1Q9NQ79 661 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 ADGRE2Q9UHX3 823 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 ACSL6Q9UKU0 697 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 CTNND2Q9UQB3 1225 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 COQ6Q9Y2Z9 468 aa5.77□□□□□ -1.49
HTT-210ENST00000512909 M0R2C6 588 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ARVCFO00192 962 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 PSPNO60542 156 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 KRT37O76014 449 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ERVFC1P60507 584 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 MVKQ03426 396 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ZNF460Q14592 562 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 NR1I3Q14994 352 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 RAB3GAP1Q15042 981 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ZNF174Q15697 407 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ARHGAP44Q17R89 818 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ADGRF1Q5T601 910 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 MBLAC2Q68D91 279 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 C16orf59Q7L2K0 433 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ABI1Q8IZP0 508 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 UBR7Q8N806 425 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ZNF281Q9Y2X9 895 aa5.76□□□□□ -1.49
HTT-210ENST00000512909 ABCA10Q8WWZ4 1543 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 NUDT19A8MXV4 375 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 F8W031 263 aaPredicted RBP5.75□□□□□ -1.49
HTT-210ENST00000512909 H7C1D1 291 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 ABLIM1O14639 778 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 NTRK1P04629 796 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 STAT3P40763 770 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 STRN3Q13033 797 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 STEAP3Q658P3 488 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 TMEM132EQ6IEE7 984 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 TRIM48Q8IWZ4 208 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 NLGN4XQ8N0W4 816 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 NETO2Q8NC67 525 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 PCDH19Q8TAB3 1148 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 SEC14L1Q92503 715 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 SCLYQ96I15 445 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 CEP89Q96ST8 783 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 CELF4Q9BZC1 486 aaKnown RBP5.75□□□□□ -1.49
HTT-210ENST00000512909 PCDH12Q9NPG4 1184 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 PPARGC1AQ9UBK2 798 aaKnown RBP5.75□□□□□ -1.49
HTT-210ENST00000512909 ADAMTS6Q9UKP5 1117 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 SYNJ2O15056 1496 aa5.75□□□□□ -1.49
HTT-210ENST00000512909 MAGI1Q96QZ7 1491 aaPredicted RBP5.75□□□□□ -1.49
HTT-210ENST00000512909 ARHGEF11O15085 1522 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 SLC12A8A0AV02 714 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 OR14I1A6ND48 311 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 HGSO14964 777 aaPredicted RBP5.74□□□□□ -1.49
HTT-210ENST00000512909 CYBBP04839 570 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 COL6A2P12110 1019 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 IRAK1P51617 712 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 GPR19Q15760 415 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 TMEM177Q53S58 311 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 PAQR3Q6TCH7 311 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 ATG4DQ86TL0 474 aaPredicted RBP5.74□□□□□ -1.49
HTT-210ENST00000512909 NLRX1Q86UT6 975 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 ANKLE2Q86XL3 938 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 RIOX2Q8IUF8 465 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 FLAD1Q8NFF5 587 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 TTC1Q99614 292 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 PLCD4Q9BRC7 762 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 BRINP2Q9C0B6 783 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 RNF32Q9H0A6 362 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 PCIF1Q9H4Z3 704 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 DSEQ9UL01 958 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 PCDHB4Q9Y5E5 795 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 X6R8D5 127 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 RIMBP3CA6NJZ7 1639 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 RIMBP3BA6NNM3 1639 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 232.6 ms