RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TTC39AQ5SRH9 613 aa11.28□□□□□ -0.6
CLCN3-208ENST00000512813 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
CLCN3-208ENST00000512813 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
CLCN3-208ENST00000512813 KAT2BQ92831 832 aa11.28□□□□□ -0.6
CLCN3-208ENST00000512813 CDCA3Q99618 268 aaPredicted RBP11.28□□□□□ -0.6
CLCN3-208ENST00000512813 ERVK-5Q9HDB9 667 aa11.28□□□□□ -0.6
CLCN3-208ENST00000512813 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
CLCN3-208ENST00000512813 HDAC6Q9UBN7 1215 aa11.28□□□□□ -0.6
CLCN3-208ENST00000512813 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
CLCN3-208ENST00000512813 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.6
CLCN3-208ENST00000512813 SLC30A4O14863 429 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 SPTLC1O15269 473 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 IDH1O75874 414 aaKnown RBP11.27□□□□□ -0.61
CLCN3-208ENST00000512813 NDUFB10O96000 172 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 SRGAP2BP0DMP2 458 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 FDX1P10109 184 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 TGM1P22735 817 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 ANKRD54Q6NXT1 300 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 SYCE2Q6PIF2 218 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 C7orf31Q8N865 590 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 POF1BQ8WVV4 589 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 COPS5Q92905 334 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 BORCS6Q96GS4 357 aa11.27□□□□□ -0.61
CLCN3-208ENST00000512813 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
CLCN3-208ENST00000512813 CRNKL1Q9BZJ0 848 aaKnown RBP11.27□□□□□ -0.61
CLCN3-208ENST00000512813 SMG1Q96Q15 3661 aaKnown RBP11.27□□□□□ -0.61
CLCN3-208ENST00000512813 F5H6K3 240 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 PER2O15055 1255 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-208ENST00000512813 KLRC3Q07444 240 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 KCNC3Q14003 757 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 BTG3Q14201 252 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-208ENST00000512813 DUSP6Q16828 381 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 SIX5Q8N196 739 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 NETO1Q8TDF5 533 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 SECISBP2LQ93073 1101 aaKnown RBP11.26□□□□□ -0.61
CLCN3-208ENST00000512813 ZNF689Q96CS4 500 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-208ENST00000512813 NECTIN4Q96NY8 510 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 POMKQ9H5K3 350 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 DCP1AQ9NPI6 582 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-208ENST00000512813 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
CLCN3-208ENST00000512813 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
CLCN3-208ENST00000512813 PLXNA4Q9HCM2 1894 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 MMP3P08254 477 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 HOXB8P17481 243 aaPredicted RBP11.25□□□□□ -0.61
CLCN3-208ENST00000512813 CDK8P49336 464 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 TBC1D8BQ0IIM8 1120 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 CCDC158Q5M9N0 1113 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 KLHL23Q8NBE8 558 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 APBB2Q92870 758 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
CLCN3-208ENST00000512813 DACH1Q9UI36 760 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 USP18Q9UMW8 372 aa11.25□□□□□ -0.61
CLCN3-208ENST00000512813 THPOP40225 353 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 TECP42680 631 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 PDE4BQ07343 736 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 SERINC5Q86VE9 423 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 C1orf210Q8IVY1 113 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 TDRD5Q8NAT2 981 aaKnown RBP11.24□□□□□ -0.61
CLCN3-208ENST00000512813 KDF1Q8NAX2 398 aaPredicted RBP11.24□□□□□ -0.61
CLCN3-208ENST00000512813 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLCN3-208ENST00000512813 APOL5Q9BWW9 433 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 CDH22Q9UJ99 828 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 FBXL21Q9UKT6 434 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 DUSP12Q9UNI6 340 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 LHX6Q9UPM6 363 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 MRPL42Q9Y6G3 142 aaKnown RBP11.24□□□□□ -0.61
CLCN3-208ENST00000512813 CACNA1IQ9P0X4 2223 aa11.24□□□□□ -0.61
CLCN3-208ENST00000512813 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 TAF4O00268 1085 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 ALAS1P13196 640 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 PSEN2P49810 448 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 MUM1L1Q5H9M0 696 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 UNQ6494/PRO21346Q6UXR6 183 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 C16orf86Q6ZW13 317 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 WDR63Q8IWG1 891 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
CLCN3-208ENST00000512813 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
CLCN3-208ENST00000512813 SDR42E1Q8WUS8 393 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 AFG1LQ8WV93 481 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 KATNAL1Q9BW62 490 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 OSBPL7Q9BZF2 842 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 PARD6AQ9NPB6 346 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 DLGAP2Q9P1A6 1054 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 NYAP2Q9P242 653 aa11.23□□□□□ -0.61
CLCN3-208ENST00000512813 SMG5Q9UPR3 1016 aaKnown RBP11.23□□□□□ -0.61
CLCN3-208ENST00000512813 HAS3O00219 553 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 ARIH2O95376 493 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 F2P00734 622 aa11.22□□□□□ -0.61
CLCN3-208ENST00000512813 TXNP10599 105 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms