RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 MICAL3Q7RTP6 2002 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 LOXHD1Q8IVV2 1947 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 CNTNAP5Q8WYK1 1306 aa13.89□□□□□ -0.19
CDK7-208ENST00000512687 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 MEIS2O14770 477 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 CALM1P0DP23 149 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 CALM2P0DP24 149 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 CALM3P0DP25 149 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 PYGBP11216 843 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 CPA1P15085 419 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 UBA1P22314 1058 aaKnown RBP13.88□□□□□ -0.19
CDK7-208ENST00000512687 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 TRAF1Q13077 416 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 SEMA3FQ13275 785 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 TSGA10IPQ3SY00 556 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 ZNF697Q5TEC3 545 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 PSRC1Q6PGN9 363 aaPredicted RBP13.88□□□□□ -0.19
CDK7-208ENST00000512687 USP17L6PQ6QN14 398 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 PPTC7Q8NI37 304 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 CXXC1Q9P0U4 656 aaPredicted RBP13.88□□□□□ -0.19
CDK7-208ENST00000512687 STXBP5LQ9Y2K9 1186 aa13.88□□□□□ -0.19
CDK7-208ENST00000512687 GGPS1O95749 300 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 HOXD8P13378 290 aaPredicted RBP13.87□□□□□ -0.19
CDK7-208ENST00000512687 GNAQP50148 359 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 HSDL1Q3SXM5 330 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 CELF3Q5SZQ8 465 aaKnown RBP13.87□□□□□ -0.19
CDK7-208ENST00000512687 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 GDF6Q6KF10 455 aaPredicted RBP13.87□□□□□ -0.19
CDK7-208ENST00000512687 DHX37Q8IY37 1157 aaKnown RBP13.87□□□□□ -0.19
CDK7-208ENST00000512687 FANCBQ8NB91 859 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 KCNB2Q92953 911 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
CDK7-208ENST00000512687 TELO2Q9Y4R8 837 aa13.87□□□□□ -0.19
CDK7-208ENST00000512687 HAS3O00219 553 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 F2P00734 622 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 CASTP20810 708 aaKnown RBP13.86□□□□□ -0.19
CDK7-208ENST00000512687 DNAJB2P25686 324 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 PBX2P40425 430 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 PSEN2P49810 448 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 PTPN11Q06124 597 aaPredicted RBP13.86□□□□□ -0.19
CDK7-208ENST00000512687 FUT2Q10981 343 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 DGKDQ16760 1214 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 UBE2SQ16763 222 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 DHX32Q7L7V1 743 aaKnown RBP13.86□□□□□ -0.19
CDK7-208ENST00000512687 OTOP2Q7RTS6 562 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 SESTD1Q86VW0 696 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 SMARCC2Q8TAQ2 1214 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
CDK7-208ENST00000512687 INPP4AQ96PE3 977 aaPredicted RBP13.86□□□□□ -0.19
CDK7-208ENST00000512687 CHD9Q3L8U1 2897 aa13.86□□□□□ -0.19
CDK7-208ENST00000512687 COL4A4P53420 1690 aaPredicted RBP13.85□□□□□ -0.19
CDK7-208ENST00000512687 UNC80Q8N2C7 3258 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.85□□□□□ -0.19
CDK7-208ENST00000512687 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.85□□□□□ -0.19
CDK7-208ENST00000512687 CDC27P30260 824 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 ICAM3P32942 547 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 HIC1Q14526 733 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 MFSD10Q14728 455 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 SPATA33Q96N06 139 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 CDX2Q99626 313 aaPredicted RBP13.85□□□□□ -0.19
CDK7-208ENST00000512687 ALG1Q9BT22 464 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
CDK7-208ENST00000512687 RTEL1Q9NZ71 1219 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 HDAC6Q9UBN7 1215 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 SNX14Q9Y5W7 946 aa13.85□□□□□ -0.19
CDK7-208ENST00000512687 MYH9P35579 1960 aaKnown RBP13.84□□□□□ -0.19
CDK7-208ENST00000512687 KLF18A0A0U1RQI7 1052 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 ZBTB43O43298 467 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 FGBP02675 491 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 TGFB3P10600 412 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 HSPA4P34932 840 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 KRT32Q14532 448 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 PTGISQ16647 500 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 RTN1Q16799 776 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 KIAA0753Q2KHM9 967 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 PCNX4Q63HM2 1172 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 WWC2Q6AWC2 1192 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 KCNV1Q6PIU1 500 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 DEFB128Q7Z7B8 93 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 MYLIPQ8WY64 445 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 CUL5Q93034 780 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 WNT8BQ93098 351 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 PBX4Q9BYU1 374 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 GTF2IRD1Q9UHL9 959 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 CHD7Q9P2D1 2997 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 PRUNE2Q8WUY3 3088 aa13.84□□□□□ -0.19
CDK7-208ENST00000512687 TMEM265A0A087WTH1 108 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 GOLGA8BA8MQT2 603 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms