RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 DEXIO95424 95 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 RRP1BQ14684 758 aaKnown RBP15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 CREG2Q8IUH2 290 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 OGFOD1Q8N543 542 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 MB21D1Q8N884 522 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 SH3GL2Q99962 352 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 TMEM39BQ9GZU3 492 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 LRWD1Q9UFC0 647 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 FAM184BQ9ULE4 1060 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 MYH1P12882 1939 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 STK36Q9NRP7 1315 aa15.37■□□□□ 0.05
SNCAIP-217ENST00000512385 TARSL2A2RTX5 802 aaKnown RBP15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 RASSF10A6NK89 507 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 TRADDQ15628 312 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 TBC1D10BQ4KMP7 808 aaPredicted RBP15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 USP17L2Q6R6M4 530 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 CATIPQ7Z7H3 387 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 PNMA1Q8ND90 353 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 WASF1Q92558 559 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 TMEM47Q9BQJ4 181 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 NHEJ1Q9H9Q4 299 aaPredicted RBP15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 SERPINA10Q9UK55 444 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 DLEC1Q9Y238 1755 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 FAM153BP0C7A2 387 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 MCM7P33993 719 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 SHMT1P34896 483 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 PKN1Q16512 942 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 SLC35G1Q2M3R5 365 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 FAM153CQ494X1 144 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 CENPHQ9H3R5 247 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 FAM153AQ9UHL3 310 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 CEP131Q9UPN4 1083 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 NAV1Q8NEY1 1877 aa15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 DDX60LQ5H9U9 1706 aaKnown RBP15.36■□□□□ 0.05
SNCAIP-217ENST00000512385 FNTAP49354 379 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 GABPAQ06546 454 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 ACTN3Q08043 901 aaPredicted RBP15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 CIAPIN1Q6FI81 312 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 MS4A14Q96JA4 679 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 RWDD2AQ9UIY3 292 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 ZNF541Q9H0D2 1346 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 PP2D1A8MPX8 630 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 WNT10BO00744 389 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 BACH1O14867 736 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 MOCS3O95396 460 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 RNF187Q5TA31 235 aaPredicted RBP15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 DHX37Q8IY37 1157 aaKnown RBP15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 RNPC3Q96LT9 517 aaKnown RBP15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 ZIM3Q96PE6 472 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 DNAJC7Q99615 494 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 SYT17Q9BSW7 474 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 VAT1LQ9HCJ6 419 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 KIF13BQ9NQT8 1826 aa15.35■□□□□ 0.05
SNCAIP-217ENST00000512385 KRT86O43790 486 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 TRIM21P19474 475 aaKnown RBP15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 PDXDC2PQ6P474 469 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 OTUD6BQ8N6M0 293 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 SPATA4Q8NEY3 305 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 PCMTD1Q96MG8 357 aaPredicted RBP15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 SUFUQ9UMX1 484 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 FRMPD2Q68DX3 1309 aaPredicted RBP15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 SSBP05455 408 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 CCDC96Q2M329 555 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 CNPY4Q8N129 248 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
SNCAIP-217ENST00000512385 RPN1P04843 607 aaKnown RBP15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 CCDC172P0C7W6 258 aa15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 YBX3P16989 372 aaKnown RBP eCLIP15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 SCP2P22307 547 aa15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 MCM3P25205 808 aa15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 GUCY2FP51841 1108 aa15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 CKAP4Q07065 602 aaKnown RBP15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 NNTQ13423 1086 aa15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 TSR1Q2NL82 804 aaKnown RBP15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 PIK3AP1Q6ZUJ8 805 aa15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 ZNF70Q9UC06 446 aaPredicted RBP15.33■□□□□ 0.05
SNCAIP-217ENST00000512385 ZNF646O15015 1829 aaPredicted RBP15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 MMP14P50281 582 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 FUT2Q10981 343 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 SPRED3Q2MJR0 410 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 ZNF507Q8TCN5 953 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 IFT81Q8WYA0 676 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 SALL4Q9UJQ4 1053 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 CAPN11Q9UMQ6 739 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
SNCAIP-217ENST00000512385 USP17L5A8MUK1 530 aa15.32■□□□□ 0.04
SNCAIP-217ENST00000512385 CARSP49589 748 aaKnown RBP15.32■□□□□ 0.04
SNCAIP-217ENST00000512385 SF3A3Q12874 501 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNCAIP-217ENST00000512385 TTC38Q5R3I4 469 aa15.32■□□□□ 0.04
SNCAIP-217ENST00000512385 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms