RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 CDKL5O76039 1030 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 MDM2Q00987 491 aaPredicted RBP18.21■□□□□ 0.51
DDX41-214ENST00000512334 SP2Q02086 613 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 CELF3Q5SZQ8 465 aaKnown RBP18.21■□□□□ 0.51
DDX41-214ENST00000512334 JAKMIP3Q5VZ66 844 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 SH3RF1Q7Z6J0 888 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 TEX2Q8IWB9 1127 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 CCDC148Q8NFR7 591 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 SPATA33Q96N06 139 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 TOX2Q96NM4 488 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 MLXIPQ9HAP2 919 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 TMEM39AQ9NV64 488 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 VPS54Q9P1Q0 977 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 ESYT2A0FGR8 921 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 PFKFB2O60825 505 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 DEXIO95424 95 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 GNA11P29992 359 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 ICAM3P32942 547 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 CDK7P50613 346 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 FAAP100Q0VG06 881 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 AP3B2Q13367 1082 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 DGKDQ16760 1214 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 PPTC7Q8NI37 304 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 EMID1Q96A84 441 aaPredicted RBP18.2■□□□□ 0.5
DDX41-214ENST00000512334 TRIM43Q96BQ3 446 aaPredicted RBP18.2■□□□□ 0.5
DDX41-214ENST00000512334 ZMYND12Q9H0C1 365 aa18.2■□□□□ 0.5
DDX41-214ENST00000512334 SPATA31C2B4DYI2 1134 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 CLK2P49760 499 aaKnown RBP18.19■□□□□ 0.5
DDX41-214ENST00000512334 NLRP5P59047 1200 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 SEMA3FQ13275 785 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 NEDD9Q14511 834 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 FAM47CQ5HY64 1035 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 MYSM1Q5VVJ2 828 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 FAM126BQ8IXS8 530 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 SLC43A3Q8NBI5 491 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 GPRASP2Q96D09 838 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 GDF15Q99988 308 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
DDX41-214ENST00000512334 GRIN2DO15399 1336 aa18.19■□□□□ 0.5
DDX41-214ENST00000512334 NOP56O00567 594 aaKnown RBP18.18■□□□□ 0.5
DDX41-214ENST00000512334 RAG1P15918 1043 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 MTMR1Q13613 665 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 ME3Q16798 604 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 CYFIP1Q7L576 1253 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 REXO1Q8N1G1 1221 aaKnown RBP18.18■□□□□ 0.5
DDX41-214ENST00000512334 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 BICD2Q8TD16 824 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 PPP1R13LQ8WUF5 828 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 SEZ6LQ9BYH1 1024 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 UBE2OQ9C0C9 1292 aaKnown RBP18.18■□□□□ 0.5
DDX41-214ENST00000512334 SH3GLB2Q9NR46 395 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 UBIAD1Q9Y5Z9 338 aa18.18■□□□□ 0.5
DDX41-214ENST00000512334 LARGE1O95461 756 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 ITGB5P18084 799 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 ZNF76P36508 570 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 SP4Q02446 784 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 NBPF20Q3BBV1 942 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 HSDL1Q3SXM5 330 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 HABP4Q5JVS0 413 aaKnown RBP18.17■□□□□ 0.5
DDX41-214ENST00000512334 METTL7BQ6UX53 244 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 RASGRP4Q8TDF6 673 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 BADQ92934 168 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 BCAS3Q9H6U6 928 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 JADE2Q9NQC1 790 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 PKD2L1Q9P0L9 805 aa18.17■□□□□ 0.5
DDX41-214ENST00000512334 LTBP2Q14767 1821 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 DOCK5Q9H7D0 1870 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 KIAA0355O15063 1070 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 ADAMTS3O15072 1205 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 B4GALT4O60513 344 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 DTNBO60941 627 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 ZNF286BP0CG31 522 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 SREBF1P36956 1147 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 ARHGAP4P98171 946 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 MCTP2Q6DN12 878 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 AIFM3Q96NN9 605 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 SENP7Q9BQF6 1050 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 MXRA8Q9BRK3 442 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 KATNAL1Q9BW62 490 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 TRPV6Q9H1D0 765 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 PRO3102Q9H379 93 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 SCN10AQ9Y5Y9 1956 aa18.16■□□□□ 0.5
DDX41-214ENST00000512334 CD4P01730 458 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 ITGB8P26012 769 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 BMP8BP34820 402 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
DDX41-214ENST00000512334 NFRKBQ6P4R8 1299 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 GIMAP8Q8ND71 665 aaPredicted RBP18.15■□□□□ 0.5
DDX41-214ENST00000512334 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 ALG1Q9BT22 464 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 PPP1R12CQ9BZL4 782 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 TRMT13Q9NUP7 481 aaKnown RBP18.15■□□□□ 0.5
DDX41-214ENST00000512334 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
DDX41-214ENST00000512334 TBX21Q9UL17 535 aa18.15■□□□□ 0.5
DDX41-214ENST00000512334 STK36Q9NRP7 1315 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms