RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 USP17L18D6R9N7 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L22D6RA61 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L17D6RBQ6 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L19D6RCP7 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L20D6RJB6 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 RAD21O60216 631 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 LIG1P18858 919 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 CCNA1P78396 465 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 ATP2C1P98194 919 aaPredicted RBP11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L24Q0WX57 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
HOXA4-203ENST00000511914 NONOQ15233 471 aaKnown RBP eCLIP11.83□□□□□ -0.52
HOXA4-203ENST00000511914 CDC37Q16543 378 aaPredicted RBP11.83□□□□□ -0.52
HOXA4-203ENST00000511914 QRICH1Q2TAL8 776 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 LRSAM1Q6UWE0 723 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 PIK3AP1Q6ZUJ8 805 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
HOXA4-203ENST00000511914 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 ENGASEQ8NFI3 743 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 NPLOC4Q8TAT6 608 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 C12orf42Q96LP6 360 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 TIGD1Q96MW7 591 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
HOXA4-203ENST00000511914 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 DACT1Q9NYF0 836 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 BTBD7Q9P203 1132 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 RABGAP1Q9Y3P9 1069 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 PCDHB6Q9Y5E3 794 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 PCDHA1Q9Y5I3 950 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 IVNS1ABPQ9Y6Y0 642 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 COL11A1P12107 1806 aaPredicted RBP11.83□□□□□ -0.52
HOXA4-203ENST00000511914 BAZ2BQ9UIF8 2168 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 ZNFX1Q9P2E3 1918 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 GOLGA6L3A6NEY3 463 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 FOSP01100 380 aaPredicted RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 VCAM1P19320 739 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 CYP2C19P33261 490 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 PRPHP41219 470 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 CLK2P49760 499 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 SNW1Q13573 536 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 EARS2Q5JPH6 523 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 KIAA1755Q5JYT7 1200 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 FAM83BQ5T0W9 1011 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 MFSD14CQ5VZR4 134 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 RESP18Q5W5W9 173 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 CATSPERGQ6ZRH7 1159 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 RBM43Q6ZSC3 357 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 FMR1NBQ8N0W7 255 aaPredicted RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 SAMD3Q8N6K7 520 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 MAF1Q9H063 256 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 RANBP17Q9H2T7 1088 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 CLSTN2Q9H4D0 955 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 RPAP3Q9H6T3 665 aaPredicted RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 FBXO2Q9UK22 296 aaPredicted RBP11.82□□□□□ -0.52
HOXA4-203ENST00000511914 A0A0G2JMZ2 1700 aa11.82□□□□□ -0.52
HOXA4-203ENST00000511914 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 SLC15A5A6NIM6 579 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 PIK3CDO00329 1044 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 KINO60870 393 aaKnown RBP11.81□□□□□ -0.52
HOXA4-203ENST00000511914 NR1I2O75469 434 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 GCFC2P16383 781 aaKnown RBP11.81□□□□□ -0.52
HOXA4-203ENST00000511914 MARCKSP29966 332 aaPredicted RBP11.81□□□□□ -0.52
HOXA4-203ENST00000511914 AP3B2Q13367 1082 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 GJC2Q5T442 439 aaPredicted RBP11.81□□□□□ -0.52
HOXA4-203ENST00000511914 NEK8Q86SG6 692 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 SPICE1Q8N0Z3 855 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 GUCD1Q96NT3 240 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 NUP88Q99567 741 aaPredicted RBP11.81□□□□□ -0.52
HOXA4-203ENST00000511914 PYM1Q9BRP8 204 aaKnown RBP11.81□□□□□ -0.52
HOXA4-203ENST00000511914 HPSEQ9Y251 543 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 ATP11BQ9Y2G3 1177 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 ZNF236Q9UL36 1845 aa11.81□□□□□ -0.52
HOXA4-203ENST00000511914 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
HOXA4-203ENST00000511914 MRE11P49959 708 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 USP11P51784 963 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 RTP1P59025 263 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 PTGDRQ13258 359 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 GRB14Q14449 540 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 DPP9Q86TI2 863 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 SLF1Q9BQI6 1058 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 COL25A1Q9BXS0 654 aaPredicted RBP11.8□□□□□ -0.52
HOXA4-203ENST00000511914 TNMDQ9H2S6 317 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 GOLPH3LQ9H4A5 285 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 PRDM5Q9NQX1 630 aaPredicted RBP11.8□□□□□ -0.52
HOXA4-203ENST00000511914 FAM13BQ9NYF5 915 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
HOXA4-203ENST00000511914 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 USP25Q9UHP3 1055 aa11.8□□□□□ -0.52
HOXA4-203ENST00000511914 MRPL11Q9Y3B7 192 aaKnown RBP11.8□□□□□ -0.52
HOXA4-203ENST00000511914 PLXNA1Q9UIW2 1896 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms