RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TRIM75PA6NK02 468 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 FKTNO75072 461 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 CAND2O75155 1236 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 AMY2AP04746 511 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 H2AFB1P0C5Y9 115 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 H2AFB2P0C5Z0 115 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 PDE6AP16499 860 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 AMY2BP19961 511 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 EGR3Q06889 387 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 CXorf57Q6NSI4 855 aaKnown RBP7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 RIOX2Q8IUF8 465 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 CISD2Q8N5K1 135 aaKnown RBP7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 MAGEB6Q8N7X4 407 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 TTC8Q8TAM2 541 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 AHCYL2Q96HN2 611 aaKnown RBP7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 FUBP3Q96I24 572 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 G6PC3Q9BUM1 346 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 VTA1Q9NP79 307 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 TNFRSF10DQ9UBN6 386 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 ZNF180Q9UJW8 692 aa7.23□□□□□ -1.25
HMGB1P47-201ENST00000511281 SLC12A8A0AV02 714 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 U2AF1L5P0DN76 240 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 RBP3P10745 1247 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 U2AF1Q01081 240 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 TERF2Q15554 542 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 DDB1Q16531 1140 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 ZPBP2Q6X784 338 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 OTOP3Q7RTS5 596 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 WAPLQ7Z5K2 1190 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 RASSF3Q86WH2 238 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 CREG2Q8IUH2 290 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 PLD6Q8N2A8 252 aaKnown RBP7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 ASB11Q8WXH4 323 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 LINC01599Q8WXQ3 324 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 TMEM169Q96HH4 297 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 EPB41L1Q9H4G0 881 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 ATP13A1Q9HD20 1204 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 LUC7LQ9NQ29 371 aaKnown RBP7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 CATSPERZQ9NTU4 200 aa7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 ARID4BQ4LE39 1312 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P47-201ENST00000511281 TCRBV5S4A2TA0A5A2 114 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 WTIPA6NIX2 430 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 FADS2P1A8MWK0 482 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 H7C1D1 291 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 JAM2P57087 298 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 SMAD3P84022 425 aaKnown RBP7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 SPIRE1Q08AE8 756 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 LRRC32Q14392 662 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 SMAD2Q15796 467 aaKnown RBP7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 PTPN21Q16825 1174 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 ABCB5Q2M3G0 1257 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 FIGNQ5HY92 759 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 SLCO6A1Q86UG4 719 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 PLEKHO2Q8TD55 490 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 MAP6Q96JE9 813 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 MTA3Q9BTC8 594 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 PDGFDQ9GZP0 370 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 H2AFY2Q9P0M6 372 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 PNMA8BQ9ULN7 279 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 RIPOR2Q9Y4F9 1068 aa7.21□□□□□ -1.26
HMGB1P47-201ENST00000511281 A0A1W2PQ45 241 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 A0A1W2PQY0 241 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 GOLGA6CA6NDK9 693 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 GOLGA6BA6NDN3 693 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 DVL2O14641 736 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 CFBP00751 764 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 GOLGA6DP0CG33 693 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 GNAT1P11488 350 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 FOSL1P15407 271 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZSCAN20P17040 1043 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 ATF3P18847 181 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 FSTP19883 344 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 RPL10P27635 214 aaKnown RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 GRIK1P39086 918 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 IARSP41252 1262 aaKnown RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 KIR2DL1P43626 348 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 KIR2DL2P43627 348 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 RECQLP46063 649 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 IRF9Q00978 393 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 PRKCQQ04759 706 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 BROXQ5VW32 411 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 CEP68Q76N32 757 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 HDGFL2Q7Z4V5 671 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 OSTM1Q86WC4 334 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZDHHC13Q8IUH4 622 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZNF610Q8N9Z0 462 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 C1orf162Q8NEQ5 155 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 JPH3Q8WXH2 748 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 DLG3Q92796 817 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 JAM3Q9BX67 310 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 TPSG1Q9NRR2 321 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 GOLGA6AQ9NYA3 693 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 LMCD1Q9NZU5 365 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 PIM2Q9P1W9 311 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 VAV3Q9UKW4 847 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 WASHC2AQ641Q2 1341 aa7.2□□□□□ -1.26
HMGB1P47-201ENST00000511281 PRR19A6NJB7 356 aa7.19□□□□□ -1.26
HMGB1P47-201ENST00000511281 CYP26A1O43174 497 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms