RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PDE1BQ01064 536 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 BLIDQ8IZY5 108 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 MPP6Q9NZW5 540 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 PTK2Q05397 1052 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 ALKBH8Q96BT7 664 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 GFPT2O94808 682 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 SURF1Q15526 300 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 FAM133BQ5BKY9 247 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 XPO1O14980 1071 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 ARHGDIAP52565 204 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 OR9Q1Q8NGQ5 310 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 CHMP6Q96FZ7 201 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 CFAP36Q96G28 342 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 NHEJ1Q9H9Q4 299 aaPredicted RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 SERPINI2O75830 405 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 SNX1Q13596 522 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 DNAL1Q4LDG9 190 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 ANKRD7Q92527 254 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 CEP19Q96LK0 163 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 ABCB6Q9NP58 842 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 MRFAP1Q9Y605 127 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 PPIP5K2O43314 1243 aa9.02□□□□□ -0.96
HTT-208ENST00000510626 ATG3Q9NT62 314 aa9.02□□□□□ -0.96
HTT-208ENST00000510626 TRAF3IP3Q9Y228 551 aa9.02□□□□□ -0.96
HTT-208ENST00000510626 ARL4CP56559 192 aa9.02□□□□□ -0.96
HTT-208ENST00000510626 KLC1Q07866 573 aa9.02□□□□□ -0.96
HTT-208ENST00000510626 LSG1Q9H089 658 aaKnown RBP9.02□□□□□ -0.96
HTT-208ENST00000510626 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.96
HTT-208ENST00000510626 PFASO15067 1338 aa9.02□□□□□ -0.96
HTT-208ENST00000510626 DENND4BO75064 1496 aaPredicted RBP9.02□□□□□ -0.96
HTT-208ENST00000510626 MED7O43513 233 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 SUGP1Q8IWZ8 645 aaKnown RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 SYT2Q8N9I0 419 aaPredicted RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 MMADHCQ9H3L0 296 aaPredicted RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 AFG3L2Q9Y4W6 797 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 DEAF1O75398 565 aaPredicted RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 RFC4P35249 363 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 NCAPH2Q6IBW4 605 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 CXorf56Q9H5V9 222 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 ZNF233A6NK53 670 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 SNAPC5O75971 98 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 ECE1P42892 770 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 FANCBQ8NB91 859 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 TSPY1Q01534 308 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 NLRP14Q86W24 1093 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 TTC39CQ8N584 583 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 IP6K1Q92551 441 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 ARL2BPQ9Y2Y0 163 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 MFAP3LO75121 409 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 TTKP33981 857 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 ADAM9Q13443 819 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 DIXDC1Q155Q3 683 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 AP4S1Q9Y587 144 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 LGALS16A8MUM7 142 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 ACADSP16219 412 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 RCN2Q14257 317 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 CPP00450 1065 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 DDX5P17844 614 aaKnown RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 EPM2AIP1Q7L775 607 aaPredicted RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 TTC13Q8NBP0 860 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 EPC1Q9H2F5 836 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 BHMT2Q9H2M3 363 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 LIN7AO14910 233 aaPredicted RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 CWF19L2Q2TBE0 894 aaKnown RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 TRIML2Q8N7C3 387 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 SPATA5Q8NB90 893 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 ALDH8A1Q9H2A2 487 aaPredicted RBP9.02□□□□□ -0.97
HTT-208ENST00000510626 MYH11P35749 1972 aa9.02□□□□□ -0.97
HTT-208ENST00000510626 YTHDC2Q9H6S0 1430 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 EEF1B2P24534 225 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 IRX5P78411 483 aaPredicted RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 TRMT2AQ8IZ69 625 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 ZNF483Q8TF39 744 aaPredicted RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 NUDCD1Q96RS6 583 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 APOBEC2Q9Y235 224 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 LAMC1P11047 1609 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 ACEP12821 1306 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 IL13P35225 146 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 MAPRE2Q15555 327 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 FAM178BQ8IXR5 827 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 P2RX5Q93086 422 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 AATFQ9NY61 560 aaKnown RBP eCLIP9.01□□□□□ -0.97
HTT-208ENST00000510626 RBL2Q08999 1139 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 SRLQ86TD4 932 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.01□□□□□ -0.97
HTT-208ENST00000510626 ATP8A1Q9Y2Q0 1164 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 SLC1A4P43007 532 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 STAT2P52630 851 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 RASSF7Q02833 373 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 IDI1Q13907 227 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 COG1Q8WTW3 980 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 TNNQ9UQP3 1299 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 TJP3O95049 919 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 PPARAQ07869 468 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 TRADDQ15628 312 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 GRAMD1BQ3KR37 738 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 RNF34Q969K3 372 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 MRPL46Q9H2W6 279 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms