RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 RSPH3Q86UC2 560 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 TBCKQ8TEA7 893 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 WHAMMQ8TF30 809 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 SPDL1Q96EA4 605 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 FAM81BQ96LP2 452 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 SRPRBQ9Y5M8 271 aaKnown RBP11.49□□□□□ -0.57
NEK1-206ENST00000510533 hCG_1984214I3L0E3 225 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 LRRN2O75325 713 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 NR5A1Q13285 461 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 AP1ARQ63HQ0 302 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 ZNF713Q8N859 430 aaPredicted RBP11.49□□□□□ -0.57
NEK1-206ENST00000510533 RNF169Q8NCN4 708 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 IFT122Q9HBG6 1241 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 SLC5A4Q9NY91 659 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 PCDHA13Q9Y5I0 950 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 SYNJ2BP-COX16A0A087WUM0 186 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 SERPING1P05155 500 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 IFNAR1P17181 557 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 CASP8Q14790 479 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 ANKRD20A4Q4UJ75 823 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 ANKRD20A8PQ5CZ79 823 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 ANKRD20A2Q5SQ80 823 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 ANKRD20A1Q5TYW2 823 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 DCAF15Q66K64 600 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 RAPH1Q70E73 1250 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 ZNF577Q9BSK1 485 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 SMYD2Q9NRG4 433 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 COX16Q9P0S2 106 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 CACNB1Q02641 598 aaPredicted RBP11.49□□□□□ -0.57
NEK1-206ENST00000510533 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
NEK1-206ENST00000510533 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
NEK1-206ENST00000510533 ACTR5Q9H9F9 607 aaPredicted RBP11.49□□□□□ -0.57
NEK1-206ENST00000510533 MLH3Q9UHC1 1453 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 PALM3A6NDB9 673 aaPredicted RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 GFPT2O94808 682 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 CPP00450 1065 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 TFDP1Q14186 410 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 RPAINQ86UA6 219 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 ZNF526Q8TF50 670 aaPredicted RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 ATP6V0A1Q93050 837 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 NCAPGQ9BPX3 1015 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 TXLNGQ9NUQ3 528 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 PPFIA2O75334 1257 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 ABL1P00519 1130 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 NR1D1P20393 614 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 FAM133BQ5BKY9 247 aaKnown RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 NEK9Q8TD19 979 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 CCHCR1Q8TD31 782 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 GCNT4Q9P109 453 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 SEPT9Q9UHD8 586 aaPredicted RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 CLIC2O15247 247 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 TTLL1O95922 423 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 KRT1P04264 644 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 STX1BP61266 288 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 IFRD2Q12894 506 aaPredicted RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 LRRC43Q8N309 656 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 PAGE5Q96GU1 130 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 TUBB6Q9BUF5 446 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 TMEM206Q9H813 350 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 ABCB6Q9NP58 842 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 EPS15L1Q9UBC2 864 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 AATKQ6ZMQ8 1374 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 MCF2LO15068 1137 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 TLR3O15455 904 aaKnown RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 PRPF3O43395 683 aaKnown RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 SLCO1A2P46721 670 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 PSMD2Q13200 908 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 SPOUT1Q5T280 376 aaKnown RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 WDR11Q9BZH6 1224 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 SPC25Q9HBM1 224 aa11.48□□□□□ -0.57
NEK1-206ENST00000510533 MRPL47Q9HD33 250 aaKnown RBP11.48□□□□□ -0.57
NEK1-206ENST00000510533 RASGRF2O14827 1237 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 LARGE1O95461 756 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 MX2P20592 715 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 EIF3BP55884 814 aaKnown RBP11.47□□□□□ -0.57
NEK1-206ENST00000510533 SEPT2Q15019 361 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 FBXO41Q8TF61 875 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 MT-ND3P03897 115 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 BIRC2Q13490 618 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 ANKRD36BP1Q96IX9 119 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 NACC1Q96RE7 527 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 ATP10AO60312 1499 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 ACTN1P12814 892 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 DYNLL1P63167 89 aaKnown RBP11.47□□□□□ -0.57
NEK1-206ENST00000510533 RAB44Q7Z6P3 723 aaPredicted RBP11.47□□□□□ -0.57
NEK1-206ENST00000510533 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 PIGSQ96S52 555 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 FBXO38Q6PIJ6 1188 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 DCLK2Q8N568 766 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms