RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 RANBP2P49792 3224 aaKnown RBP13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 CPLX1O14810 134 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 KIAA0355O15063 1070 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 FIBPO43427 364 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 DEXIO95424 95 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 LARGE1O95461 756 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 CD4P01730 458 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 MMP3P08254 477 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 BMP8BP34820 402 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 SREBF1P36956 1147 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 AKAP17AQ02040 695 aaKnown RBP13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 SSRP1Q08945 709 aaKnown RBP13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 AP3B2Q13367 1082 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 NPY5RQ15761 445 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 HSDL1Q3SXM5 330 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 GNPTABQ3T906 1256 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 BRDTQ58F21 947 aaPredicted RBP13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 FAM126BQ8IXS8 530 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 DHX37Q8IY37 1157 aaKnown RBP13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 KAT2BQ92831 832 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 GPRASP2Q96D09 838 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 ANO3Q9BYT9 981 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 C22orf23Q9BZE7 217 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 JADE2Q9NQC1 790 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 TMEM260Q9NX78 707 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 MYH6P13533 1939 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 ALPK3Q96L96 1907 aa13.46□□□□□ -0.25
HMGXB3-203ENST00000510472 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 MEIS1O00470 390 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 MAFGO15525 162 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 EDIL3O43854 480 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 PQBP1O60828 265 aaKnown RBP13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 ATP9AO75110 1047 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 PPFIA4O75335 1185 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 GGPS1O95749 300 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 MYL3P08590 195 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 CLTBP09497 229 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 ITGB8P26012 769 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 GNA11P29992 359 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 PSMC6P62333 389 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 ST3GAL1Q11201 340 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 NLRX1Q86UT6 975 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 TRIM22Q8IYM9 498 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 CCDC12Q8WUD4 166 aaPredicted RBP13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 C6orf50Q9HD87 102 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 VPS54Q9P1Q0 977 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
HMGXB3-203ENST00000510472 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 STK36Q9NRP7 1315 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 M0R2N6 131 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 HAS3O00219 553 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 CYP3A4P08684 503 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 KCNA2P16389 499 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 NEDD9Q14511 834 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 DGKDQ16760 1214 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 JAKMIP3Q5VZ66 844 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 METTL7BQ6UX53 244 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 CYP2W1Q8TAV3 490 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 PGBD1Q96JS3 809 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 SPATA33Q96N06 139 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 MXRA8Q9BRK3 442 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 TELO2Q9Y4R8 837 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 GTF3C3Q9Y5Q9 886 aa13.44□□□□□ -0.26
HMGXB3-203ENST00000510472 CDKL5O76039 1030 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 F2P00734 622 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 ARHGAP4P98171 946 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 HABP4Q5JVS0 413 aaKnown RBP13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 NFRKBQ6P4R8 1299 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 SESTD1Q86VW0 696 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 REXO1Q8N1G1 1221 aaKnown RBP13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 DAGLBQ8NCG7 672 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 CCDC148Q8NFR7 591 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 CDHR1Q96JP9 859 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 C16orf70Q9BSU1 422 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 EHMT1Q9H9B1 1298 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 MLXIPQ9HAP2 919 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 TMEM39AQ9NV64 488 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 LIMCH1Q9UPQ0 1083 aa13.43□□□□□ -0.26
HMGXB3-203ENST00000510472 FAM86B1E9PN63 330 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 B4GALT4O60513 344 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 DTNBO60941 627 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 FAM86B2P0C5J1 330 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 ARP10275 920 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 CIITAP33076 1130 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 NLRP5P59047 1200 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 PTPN11Q06124 597 aaPredicted RBP13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 MTMR1Q13613 665 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms