RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 WNT8BQ93098 351 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 PCDHGC5Q9Y5F6 944 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 ADGRA3Q8IWK6 1321 aa16.16■□□□□ 0.18
HMGCR-208ENST00000509431 MYO10Q9HD67 2058 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.15■□□□□ 0.18
HMGCR-208ENST00000509431 PTPDC1A2A3K4 754 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 LMNAP02545 664 aaKnown RBP16.15■□□□□ 0.18
HMGCR-208ENST00000509431 THPOP40225 353 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 AACSQ86V21 672 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 KIAA2013Q8IYS2 634 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 ALG1Q9BT22 464 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
HMGCR-208ENST00000509431 BARX2Q9UMQ3 279 aaPredicted RBP16.15■□□□□ 0.18
HMGCR-208ENST00000509431 PLAGL2Q9UPG8 496 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
HMGCR-208ENST00000509431 PKD1L2Q7Z442 2459 aa16.14■□□□□ 0.18
HMGCR-208ENST00000509431 GLP2RO95838 553 aa16.14■□□□□ 0.17
HMGCR-208ENST00000509431 CAMK1Q14012 370 aa16.14■□□□□ 0.17
HMGCR-208ENST00000509431 MFSD10Q14728 455 aa16.14■□□□□ 0.17
HMGCR-208ENST00000509431 CCDC62Q6P9F0 684 aa16.14■□□□□ 0.17
HMGCR-208ENST00000509431 KREMEN2Q8NCW0 462 aa16.14■□□□□ 0.17
HMGCR-208ENST00000509431 DNAJC2Q99543 621 aaKnown RBP16.14■□□□□ 0.17
HMGCR-208ENST00000509431 PRR12Q9ULL5 1215 aa16.14■□□□□ 0.17
HMGCR-208ENST00000509431 ATRXP46100 2492 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 HAS3O00219 553 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 CAND2O75155 1236 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 BCAR3O75815 825 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 CSPG5O95196 566 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 ARIH2O95376 493 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 F2P00734 622 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 NRIP1P48552 1158 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 ARHGAP1Q07960 439 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 KIAA0753Q2KHM9 967 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 PPP4R3BQ5MIZ7 849 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 ADGRD2Q7Z7M1 963 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 SERINC5Q86VE9 423 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 DHX37Q8IY37 1157 aaKnown RBP16.13■□□□□ 0.17
HMGCR-208ENST00000509431 MFSD1Q9H3U5 465 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 MAP1BP46821 2468 aaKnown RBP16.13■□□□□ 0.17
HMGCR-208ENST00000509431 MYH7P12883 1935 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
HMGCR-208ENST00000509431 DNAH14Q0VDD8 3507 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 NFIBO00712 420 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 CALML3P27482 149 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 UBE3CQ15386 1083 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 RCSD1Q6JBY9 416 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 RNF207Q6ZRF8 634 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 HAUS7Q99871 368 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 RC3H2Q9HBD1 1191 aaKnown RBP16.12■□□□□ 0.17
HMGCR-208ENST00000509431 PNMA2Q9UL42 364 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
HMGCR-208ENST00000509431 IPO8O15397 1037 aaKnown RBP16.11■□□□□ 0.17
HMGCR-208ENST00000509431 MCCP23508 829 aa16.11■□□□□ 0.17
HMGCR-208ENST00000509431 SNAP25P60880 206 aa16.11■□□□□ 0.17
HMGCR-208ENST00000509431 ZNF200P98182 395 aaPredicted RBP16.11■□□□□ 0.17
HMGCR-208ENST00000509431 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
HMGCR-208ENST00000509431 SLC30A10Q6XR72 485 aa16.11■□□□□ 0.17
HMGCR-208ENST00000509431 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
HMGCR-208ENST00000509431 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
HMGCR-208ENST00000509431 CHD6Q8TD26 2715 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 KIAA1217Q5T5P2 1943 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 SRGAP2BP0DMP2 458 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 SDHBP21912 280 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 ANGPT1Q15389 498 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 NEDD1Q8NHV4 660 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 SPPL3Q8TCT6 385 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
HMGCR-208ENST00000509431 CDCA3Q99618 268 aaPredicted RBP16.1■□□□□ 0.17
HMGCR-208ENST00000509431 TLE6Q9H808 572 aa16.1■□□□□ 0.17
HMGCR-208ENST00000509431 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 BRD1O95696 1058 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 ITGB1P05556 798 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 TSPY3P0CV98 308 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 TSPY8P0CW00 308 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 SLFNL1Q499Z3 407 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 KCTD1Q719H9 257 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
HMGCR-208ENST00000509431 CCDC105Q8IYK2 499 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 PPTC7Q8NI37 304 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 ATP8B4Q8TF62 1192 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 ZNF689Q96CS4 500 aaPredicted RBP16.09■□□□□ 0.17
HMGCR-208ENST00000509431 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 TTC3P53804 2025 aa16.09■□□□□ 0.17
HMGCR-208ENST00000509431 ZFHX4Q86UP3 3567 aa16.08■□□□□ 0.17
HMGCR-208ENST00000509431 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.17
HMGCR-208ENST00000509431 SPTBN2O15020 2390 aa16.08■□□□□ 0.17
HMGCR-208ENST00000509431 DNAJB1P25685 340 aa16.08■□□□□ 0.16
HMGCR-208ENST00000509431 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
HMGCR-208ENST00000509431 RPS6P62753 249 aaKnown RBP16.08■□□□□ 0.16
HMGCR-208ENST00000509431 POF1BQ8WVV4 589 aa16.08■□□□□ 0.16
HMGCR-208ENST00000509431 HINFPQ9BQA5 517 aa16.08■□□□□ 0.16
HMGCR-208ENST00000509431 CFAP47Q6ZTR5 3102 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms