RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 KDM3AQ9Y4C1 1321 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 TRAF5O00463 557 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 ZNF263O14978 683 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
SEC31A-228ENST00000509142 CCDC40Q4G0X9 1142 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 CCDC65Q8IXS2 484 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 NDST4Q9H3R1 872 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 LCMT1Q9UIC8 334 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
SEC31A-228ENST00000509142 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 PDE2AO00408 941 aaPredicted RBP12.16□□□□□ -0.46
SEC31A-228ENST00000509142 PSMD2Q13200 908 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 VWA3BQ502W6 1294 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 MIIPQ5JXC2 388 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 FAM26FQ5R3K3 315 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 TMEM179Q6ZVK1 233 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 HAS1Q92839 578 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 JAKMIP2Q96AA8 810 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 AMNQ9BXJ7 453 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 TDRD3Q9H7E2 651 aaKnown RBP12.16□□□□□ -0.46
SEC31A-228ENST00000509142 DNAJC18Q9H819 358 aa12.16□□□□□ -0.46
SEC31A-228ENST00000509142 NHEJ1Q9H9Q4 299 aaPredicted RBP12.16□□□□□ -0.46
SEC31A-228ENST00000509142 F5H6K3 240 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 ZNF185O15231 689 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 EDIL3O43854 480 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 LRRC63Q05C16 580 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 KLRC3Q07444 240 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 CASP8Q14790 479 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 MAN2A1Q16706 1144 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 PRR16Q569H4 304 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 RBM26Q5T8P6 1007 aaKnown RBP12.15□□□□□ -0.46
SEC31A-228ENST00000509142 CACNA2D4Q7Z3S7 1137 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 CCDC84Q86UT8 332 aaPredicted RBP12.15□□□□□ -0.46
SEC31A-228ENST00000509142 E9PMD0 336 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 PSMD14O00487 310 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
SEC31A-228ENST00000509142 ZNF76P36508 570 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 CLK2P49760 499 aaKnown RBP12.15□□□□□ -0.46
SEC31A-228ENST00000509142 MEA1Q16626 185 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 WHAMMP3Q1A5X7 153 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
SEC31A-228ENST00000509142 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 TMEM51Q9NW97 253 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 FAM198AQ9UFP1 575 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 FAN1Q9Y2M0 1017 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 EPHB6O15197 1021 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 MYBL2P10244 700 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 AOC3Q16853 763 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 DACT2Q5SW24 774 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 FOXR1Q6PIV2 292 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
SEC31A-228ENST00000509142 GPBP1Q86WP2 473 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 FBXO11Q86XK2 927 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 ERGIC2Q96RQ1 377 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 TMOD2Q9NZR1 351 aa12.15□□□□□ -0.46
SEC31A-228ENST00000509142 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 PLSCR1O15162 318 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 CHRNA5P30532 468 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 USP11P51784 963 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
SEC31A-228ENST00000509142 KIF5AQ12840 1032 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 COASYQ13057 564 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 TMEM119Q4V9L6 283 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 NELFCDQ8IXH7 590 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 CALCOCO1Q9P1Z2 691 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 VPS18Q9P253 973 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 POTECB2RU33 542 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 ZMYND10O75800 440 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 PLA2G4BP0C869 781 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 HDLBPQ00341 1268 aaKnown RBP12.14□□□□□ -0.47
SEC31A-228ENST00000509142 CYP27A1Q02318 531 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 ECM1Q16610 540 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 COBLL1Q53SF7 1204 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 HDXQ7Z353 690 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 GPIHBP1Q8IV16 184 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 CCDC170Q8IYT3 715 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 ERMNQ8TAM6 284 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 MKL1Q969V6 931 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 IQCDQ96DY2 449 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 HINFPQ9BQA5 517 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 IDI2Q9BXS1 227 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 AKR1B10O60218 316 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 GH2P01242 217 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 TUBB4BP68371 445 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 CNKSR1Q969H4 720 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 MRIQ9BWK5 157 aa12.14□□□□□ -0.47
SEC31A-228ENST00000509142 MACROD2A1Z1Q3 448 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
SEC31A-228ENST00000509142 PHACTR2O75167 634 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 STAT3P40763 770 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 EPS15P42566 896 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 LMAN1P49257 510 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
SEC31A-228ENST00000509142 FKBP3Q00688 224 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms