RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 KCNMB3Q9NPA1 279 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 SAGE1Q9NXZ1 904 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 UBIAD1Q9Y5Z9 338 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 DDX49Q9Y6V7 483 aaKnown RBP11.74□□□□□ -0.53
RFC1-211ENST00000509084 IGLV3-22A0A075B6J6 115 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 VWA3AA6NCI4 1184 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 MEIS1O00470 390 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 EIF3JO75822 258 aaKnown RBP11.73□□□□□ -0.53
RFC1-211ENST00000509084 MYCLP12524 364 aaPredicted RBP11.73□□□□□ -0.53
RFC1-211ENST00000509084 CMA1P23946 247 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 FCGRTP55899 365 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 PDE4DQ08499 809 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 MTMR1Q13613 665 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 KIF22Q14807 665 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 AXDND1Q5T1B0 1012 aaPredicted RBP11.73□□□□□ -0.53
RFC1-211ENST00000509084 MSL3Q8N5Y2 521 aaKnown RBP11.73□□□□□ -0.53
RFC1-211ENST00000509084 IL31RAQ8NI17 732 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 LENG9Q96B70 501 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 INPP4AQ96PE3 977 aaPredicted RBP11.73□□□□□ -0.53
RFC1-211ENST00000509084 WDR11Q9BZH6 1224 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
RFC1-211ENST00000509084 LRRC37A2A6NM11 1700 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 TNPO2O14787 897 aaKnown RBP11.72□□□□□ -0.53
RFC1-211ENST00000509084 SLC26A4O43511 780 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 ITGB5P18084 799 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 TIE1P35590 1138 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
RFC1-211ENST00000509084 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 MAP2K5Q13163 448 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 PDIA5Q14554 519 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 RESP18Q5W5W9 173 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
RFC1-211ENST00000509084 DPP9Q86TI2 863 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 FSIP1Q8NA03 581 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 ETNPPLQ8TBG4 499 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 SYAP1Q96A49 352 aaPredicted RBP11.72□□□□□ -0.53
RFC1-211ENST00000509084 RIT2Q99578 217 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 ZNF577Q9BSK1 485 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 TTC12Q9H892 705 aaPredicted RBP11.72□□□□□ -0.53
RFC1-211ENST00000509084 PCDHA12Q9UN75 941 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 PLXNA1Q9UIW2 1896 aa11.72□□□□□ -0.53
RFC1-211ENST00000509084 ASTN1O14525 1302 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 FAM237AA0A1B0GTK4 181 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 MSH4O15457 936 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
RFC1-211ENST00000509084 PGK2P07205 417 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 HOXC6P09630 235 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 RGS2P41220 211 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 TXKP42681 527 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 SP3Q02447 781 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.53
RFC1-211ENST00000509084 FAM160A1Q05DH4 1040 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 IRF5Q13568 498 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 ARHGEF6Q15052 776 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 MORN1Q5T089 497 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 LRCH2Q5VUJ6 765 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 KCNV1Q6PIU1 500 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 ERMNQ8TAM6 284 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 SLC5A5Q92911 643 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 CCDC34Q96HJ3 373 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 CLIC6Q96NY7 704 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.53
RFC1-211ENST00000509084 TEKT3Q9BXF9 490 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 CSRNP2Q9H175 543 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 KCNH7Q9NS40 1196 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 TBC1D22BQ9NU19 505 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 RNF186Q9NXI6 227 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 MRVI1Q9Y6F6 885 aa11.71□□□□□ -0.53
RFC1-211ENST00000509084 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
RFC1-211ENST00000509084 MGAMO43451 1857 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 SYNGAP1Q96PV0 1343 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 IPO5O00410 1097 aaKnown RBP11.7□□□□□ -0.54
RFC1-211ENST00000509084 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
RFC1-211ENST00000509084 TRAK2O60296 914 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 GAS7O60861 476 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 ICAM3P32942 547 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 UBA7P41226 1012 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 TECP42680 631 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 LACTBP83111 547 aaPredicted RBP11.7□□□□□ -0.54
RFC1-211ENST00000509084 HAUS3Q68CZ6 603 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 IGSF22Q8N9C0 903 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 GIMAP8Q8ND71 665 aaPredicted RBP11.7□□□□□ -0.54
RFC1-211ENST00000509084 HAS1Q92839 578 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 MAML3Q96JK9 1138 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 FGD4Q96M96 766 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 APBA2Q99767 749 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 BEGAINQ9BUH8 593 aa11.7□□□□□ -0.54
RFC1-211ENST00000509084 CCSER1Q9C0I3 900 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms