RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ARHGAP1Q07960 439 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 PRPF38BQ5VTL8 546 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 NLRX1Q86UT6 975 aa12.13□□□□□ -0.47
POLR2J3-213ENST00000508848 M0R2N6 131 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 ST18O60284 1047 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 ARIH2O95376 493 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 CTDNEP1O95476 244 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 CIITAP33076 1130 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 PTPN11Q06124 597 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 SEPT14Q6ZU15 432 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 IL31RAQ8NI17 732 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 PPTC7Q8NI37 304 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 DPF3Q92784 378 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 JADE2Q9NQC1 790 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 PCDHA4Q9UN74 947 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
POLR2J3-213ENST00000508848 KAT6AQ92794 2004 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 ARVCFO00192 962 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 DGKDQ16760 1214 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 LRRC26Q2I0M4 334 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 CEP55Q53EZ4 464 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 ANO3Q9BYT9 981 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 DDX49Q9Y6V7 483 aaKnown RBP12.11□□□□□ -0.47
POLR2J3-213ENST00000508848 CYP3A7-CYP3A51PA0A087WV96 503 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 A0A0U1RQG5 324 aaPredicted RBP12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 MYADML2A6NDP7 307 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 FDPSP14324 419 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 ITGB5P18084 799 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 CYP3A7P24462 503 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 BMP8BP34820 402 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 SP2Q02086 613 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 STK3Q13188 491 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 NPY5RQ15761 445 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 UBE2SQ16763 222 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 LY6KQ17RY6 165 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 MOXD1Q6UVY6 613 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 SESTD1Q86VW0 696 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 BLIDQ8IZY5 108 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 PHF20Q9BVI0 1012 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 ORC3Q9UBD5 711 aaPredicted RBP12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 NFASCO94856 1347 aa12.1□□□□□ -0.47
POLR2J3-213ENST00000508848 RANBP2P49792 3224 aaKnown RBP12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 DCDC2CA8MYV0 355 aa12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 KIAA0355O15063 1070 aa12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 NLRP5P59047 1200 aa12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 SEMA3FQ13275 785 aa12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 MTMR1Q13613 665 aa12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 ITGA7Q13683 1181 aa12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 NSUN7Q8NE18 718 aaKnown RBP12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
POLR2J3-213ENST00000508848 WDR81Q562E7 1941 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 A0A1W2PPC1 479 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 HAS3O00219 553 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 GGPS1O95749 300 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 F2P00734 622 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 CD4P01730 458 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 MMP3P08254 477 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 SUPT20HL2P0C7V6 817 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 KCNA2P16389 499 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 UBA1P22314 1058 aaKnown RBP12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 RTP1P59025 263 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 BEX3Q00994 111 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 SETQ01105 290 aaPredicted RBP12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 TLE2Q04725 743 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 CXCL17Q6UXB2 119 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 KRT25Q7Z3Z0 450 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 AFG1LQ8WV93 481 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 FERMT2Q96AC1 680 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 MBOAT7Q96N66 472 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 NAP1L4Q99733 375 aaKnown RBP12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 KATNAL1Q9BW62 490 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 KCNH7Q9NS40 1196 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 VPS54Q9P1Q0 977 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 MYH9P35579 1960 aaKnown RBP12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 DOCK5Q9H7D0 1870 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 GRIN2DO15399 1336 aa12.08□□□□□ -0.48
POLR2J3-213ENST00000508848 IGLV3-22A0A075B6J6 115 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 H0YGN5 161 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 ATG7O95352 703 aa12.07□□□□□ -0.48
POLR2J3-213ENST00000508848 LARGE1O95461 756 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms