RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 DDAH1O94760 285 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 STK10O94804 968 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 EPHX1P07099 455 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 SYPP08247 313 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 CD247P20963 164 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 GTF2F1P35269 517 aaKnown RBP eCLIP4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 ZNF445P59923 1031 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 PPP2R5DQ14738 602 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 TCEAL1Q15170 157 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 RALGPS1Q5JS13 557 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 HEATR6Q6AI08 1181 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 CRTC3Q6UUV7 619 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 SIAH1Q8IUQ4 282 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 USHBP1Q8N6Y0 703 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 MARCH10Q8NA82 808 aaPredicted RBP4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 DAGLBQ8NCG7 672 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 LRRN4CLQ8ND94 238 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 MICAL1Q8TDZ2 1067 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 SMARCC1Q92922 1105 aaPredicted RBP4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 PEAK1Q9H792 1746 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 OVOS2A0A0G2JMS6 1433 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 BCL9O00512 1426 aa4.8□□□□□ -1.64
UBE2D3-226ENST00000508635 LRRC37A3O60309 1634 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 PARD3Q8TEW0 1356 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 CCDC7Q96M83 1385 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 H0Y8X5 98 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 EXOC5O00471 708 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 FYB1O15117 783 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ITGA4P13612 1032 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 RPL10P27635 214 aaKnown RBP4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 CTSKP43235 329 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 HK2P52789 917 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 KRTAP1-1Q07627 177 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 R3HDM1Q15032 1099 aaKnown RBP4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ANKRD39Q53RE8 183 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ZPBP2Q6X784 338 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 PTF1AQ7RTS3 328 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 FAM178BQ8IXR5 827 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ZNF655Q8N720 491 aaPredicted RBP4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 CELF2-AS1Q8N7Q2 184 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ENOX1Q8TC92 643 aaKnown RBP4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 IP6K1Q92551 441 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 PPP1R14AQ96A00 147 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 COG3Q96JB2 828 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ZDHHC15Q96MV8 337 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 TOX2Q96NM4 488 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ALPK1Q96QP1 1244 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 ADAMTS10Q9H324 1103 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 NOL6Q9H6R4 1146 aaKnown RBP4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 TCFL5Q9UL49 500 aa4.79□□□□□ -1.64
UBE2D3-226ENST00000508635 RGPD5Q99666 1765 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 MAP3K19Q56UN5 1328 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 PLSCR1O15162 318 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 PAPLNO95428 1278 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 IL2RBP14784 551 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 FBLN1P23142 703 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 HOXC9P31274 260 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 PCBP3P57721 371 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 TEKQ02763 1124 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 FXNQ16595 210 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 FIBCD1Q8N539 461 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 ZSCAN18Q8TBC5 510 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 LGR4Q9BXB1 951 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 KLHL25Q9H0H3 589 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 SUGT1Q9Y2Z0 365 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 WNK3Q9BYP7 1800 aa4.78□□□□□ -1.64
UBE2D3-226ENST00000508635 KLF4O43474 513 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 GJB6O95452 261 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 AMPHP49418 695 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 ERVFC1P60507 584 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 NCAPHQ15003 741 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 CWF19L1Q69YN2 538 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 RNF111Q6ZNA4 994 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 CKAP2LQ8IYA6 745 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 SYTL4Q96C24 671 aaPredicted RBP4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 LTV1Q96GA3 475 aaPredicted RBP4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 TRIM55Q9BYV6 548 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 GBP3Q9H0R5 595 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 C19orf73Q9NVV2 129 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 WHRNQ9P202 907 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 APEX2Q9UBZ4 518 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 SUSD2Q9UGT4 822 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 ZMYM5Q9UJ78 669 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 FHOD1Q9Y613 1164 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 LTN1O94822 1766 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 TNS2Q63HR2 1409 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 SRCAPQ6ZRS2 3230 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 RREB1Q92766 1687 aa4.77□□□□□ -1.65
UBE2D3-226ENST00000508635 LRP5O75197 1615 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 ANKRD34BA5PLL1 514 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 KCNQ2O43526 872 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 VAMP4O75379 141 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 PPM1BO75688 479 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 GSNP06396 782 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 CD3EP07766 207 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 GSTM1P09488 218 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 ZGLP1P0C6A0 271 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 VAV1P15498 845 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 RRS1Q15050 365 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 TXNRD1Q16881 649 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms