RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
RNF4-210ENST00000508235 PGBD1Q96JS3 809 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 GLT1D1Q96MS3 346 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 POLR3EQ9NVU0 708 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 UBIAD1Q9Y5Z9 338 aa17.11■□□□□ 0.33
RNF4-210ENST00000508235 A0A1W2PQ45 241 aaPredicted RBP17.1■□□□□ 0.33
RNF4-210ENST00000508235 A0A1W2PQY0 241 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 MYADML2A6NDP7 307 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 CTAGE5O15320 804 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 CYP3A4P08684 503 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 ITGB5P18084 799 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 CEP55Q53EZ4 464 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 TMEM63BQ5T3F8 832 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 NIPA1Q7RTP0 329 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 COPS5Q92905 334 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 ZFP91Q96JP5 570 aaPredicted RBP17.1■□□□□ 0.33
RNF4-210ENST00000508235 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 MXRA8Q9BRK3 442 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 MLXIPQ9HAP2 919 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 STARD7Q9NQZ5 370 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 KCNJ14Q9UNX9 436 aa17.1■□□□□ 0.33
RNF4-210ENST00000508235 A6NJR5 290 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 M0R2N6 131 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
RNF4-210ENST00000508235 GGPS1O95749 300 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 UBA1P22314 1058 aaKnown RBP17.09■□□□□ 0.33
RNF4-210ENST00000508235 USP11P51784 963 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 BEX3Q00994 111 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 ARHGAP1Q07960 439 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
RNF4-210ENST00000508235 PPTC7Q8NI37 304 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 DPF3Q92784 378 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 FERMT2Q96AC1 680 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 SEZ6LQ9BYH1 1024 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
RNF4-210ENST00000508235 ELP1O95163 1332 aa17.09■□□□□ 0.33
RNF4-210ENST00000508235 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 KRT2P35908 639 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.32
RNF4-210ENST00000508235 NONOQ15233 471 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■■■□ 25
RNF4-210ENST00000508235 SAFBQ15424 915 aaKnown RBP eCLIP17.08■□□□□ 0.32
RNF4-210ENST00000508235 NPY5RQ15761 445 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 DGKDQ16760 1214 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 C1orf53Q5VUE5 145 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 MYSM1Q5VVJ2 828 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 METTL7BQ6UX53 244 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 SLC39A5Q6ZMH5 540 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 SPATA33Q96N06 139 aa17.08■□□□□ 0.32
RNF4-210ENST00000508235 MEIS1O00470 390 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
RNF4-210ENST00000508235 ADAMTS3O15072 1205 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 EVI5O60447 810 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 MMP1P03956 469 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 MMP3P08254 477 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 CIITAP33076 1130 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 IRX5P78411 483 aaPredicted RBP17.07■□□□□ 0.32
RNF4-210ENST00000508235 SP2Q02086 613 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 SEMA3FQ13275 785 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 TBCKQ8TEA7 893 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 AFG1LQ8WV93 481 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 KCNH7Q9NS40 1196 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 NR2E3Q9Y5X4 410 aa17.07■□□□□ 0.32
RNF4-210ENST00000508235 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 DOCK5Q9H7D0 1870 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
RNF4-210ENST00000508235 DTNBO60941 627 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 PPFIA4O75335 1185 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 MYL3P08590 195 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 PTGS1P23219 599 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
RNF4-210ENST00000508235 SNX17Q15036 470 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 KRT40Q6A162 431 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 CXCL17Q6UXB2 119 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 PLA2G4DQ86XP0 818 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 NAP1L4Q99733 375 aaKnown RBP17.06■□□□□ 0.32
RNF4-210ENST00000508235 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 MTG1Q9BT17 334 aaPredicted RBP17.06■□□□□ 0.32
RNF4-210ENST00000508235 GJB4Q9NTQ9 266 aa17.06■□□□□ 0.32
RNF4-210ENST00000508235 KCNA2P16389 499 aa17.05■□□□□ 0.32
RNF4-210ENST00000508235 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
RNF4-210ENST00000508235 LRRC26Q2I0M4 334 aa17.05■□□□□ 0.32
RNF4-210ENST00000508235 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
RNF4-210ENST00000508235 CYFIP1Q7L576 1253 aa17.05■□□□□ 0.32
RNF4-210ENST00000508235 KATNAL1Q9BW62 490 aa17.05■□□□□ 0.32
RNF4-210ENST00000508235 SMC3Q9UQE7 1217 aa17.05■□□□□ 0.32
RNF4-210ENST00000508235 NFASCO94856 1347 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 FAM86B1E9PN63 330 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 FAM86B2P0C5J1 330 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 FOSBP53539 338 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 ITGA7Q13683 1181 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
RNF4-210ENST00000508235 PRR16Q569H4 304 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms