RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TTYH3Q9C0H2 523 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 SH2D4AQ9H788 454 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 KAT14Q9H8E8 782 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 PKD2L1Q9P0L9 805 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 ARPP21Q9UBL0 812 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 PCDHA4Q9UN74 947 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 PCDHA13Q9Y5I0 950 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 MYH3P11055 1940 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 PLCH1Q4KWH8 1693 aa5.5□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZC3H4Q9UPT8 1303 aaKnown RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 MYH6P13533 1939 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 A0A0U1RQJ8 604 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 PVALEFA0A1B0GWK0 134 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 SSU72P8A0A1W2PR75 194 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 MACROD2A1Z1Q3 448 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 FAM187AA6NFU0 413 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 TMCO5BA8MYB1 307 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 B4DLN1 442 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 H0YHG0 523 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 UBE2Q2LH0YL09 131 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 EXOC5O00471 708 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CES2O00748 559 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 WNT7AO00755 349 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 NDUFAB1O14561 156 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 ENC1O14682 589 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 AKR1B10O60218 316 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 FSBPO95073 299 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 PLEKHA8P1O95397 391 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 GPTP24298 496 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CASP1P29466 404 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CDC25AP30304 524 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 RDXP35241 583 aaKnown RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CLK2P49760 499 aaKnown RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 MNAT1P51948 309 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 WNT7BP56706 349 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 TNNC1P63316 161 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 LRRC63Q05C16 580 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 C2orf54Q08AI8 447 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 MAN2A1Q16706 1144 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CAVIN4Q5BKX8 364 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 C10orf76Q5T2E6 689 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 FOXR1Q6PIV2 292 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 LRIG3Q6UXM1 1119 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 KDM7AQ6ZMT4 941 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 KRT25Q7Z3Z0 450 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 DZIP3Q86Y13 1208 aaKnown RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 IRF2BP1Q8IU81 584 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CREG2Q8IUH2 290 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CD302Q8IX05 232 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF34Q8IZ26 560 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CNPY4Q8N129 248 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CMTR1Q8N1G2 835 aaKnown RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 SPATA4Q8NEY3 305 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CABLES1Q8TDN4 633 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 ATRIPQ8WXE1 791 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 SYN2Q92777 582 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 P3H4Q92791 437 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 LRRC45Q96CN5 670 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CALML4Q96GE6 196 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 CABS1Q96KC9 395 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 OSBPL9Q96SU4 736 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 C7orf25Q9BPX7 421 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 RAB34Q9BZG1 259 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 ACTR5Q9H9F9 607 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 GPBP1L1Q9HC44 474 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 INCENPQ9NQS7 918 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 ATP8A2Q9NTI2 1148 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 EVA1BQ9NVM1 165 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 HDAC6Q9UBN7 1215 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 STK17AQ9UEE5 414 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 LIMD1Q9UGP4 676 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 PLAGL2Q9UPG8 496 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 GDAQ9Y2T3 454 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 TACC3Q9Y6A5 838 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 DUOX1Q9NRD9 1551 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 RREB1Q92766 1687 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 ANKRD36CQ5JPF3 1778 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 BCORQ6W2J9 1755 aa5.49□□□□□ -1.53
HMGB3P16-201ENST00000508037 TTC24A2A3L6 582 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 RNF225M0QZC1 329 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 AGPSO00116 658 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 MEFVO15553 781 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 SLC26A4O43511 780 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 KLRC4O43908 158 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 SRGAP2O75044 1071 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 PRDM1O75626 825 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 GNA14O95837 355 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 ABL1P00519 1130 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 OR52Z1P0C646 297 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 CYP19A1P11511 503 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 ANXA13P27216 316 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 GNA11P29992 359 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 MAGEA1P43355 309 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 LIG3P49916 1009 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 KIF11P52732 1056 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 EVA1CP58658 441 aa5.48□□□□□ -1.53
HMGB3P16-201ENST00000508037 ASIC1P78348 528 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms