RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 EYA3Q99504 573 aa8.22□□□□□ -1.09
CLCN3-206ENST00000507875 OSMRQ99650 979 aa8.22□□□□□ -1.09
CLCN3-206ENST00000507875 GGA1Q9UJY5 639 aa8.22□□□□□ -1.09
CLCN3-206ENST00000507875 SLX4Q8IY92 1834 aa8.22□□□□□ -1.09
CLCN3-206ENST00000507875 KCNA3P22001 575 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 CHRNA5P30532 468 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 HIBADHP31937 336 aaKnown RBP8.21□□□□□ -1.09
CLCN3-206ENST00000507875 NEK2P51955 445 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 ITKQ08881 620 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 MAP3K12Q12852 859 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 RABEP1Q15276 862 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 FAM209AQ5JX71 171 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 Q6ZVU0 165 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 C2CD5Q86YS7 1000 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 TTLL6Q8N841 843 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 CEP120Q8N960 986 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 CEP63Q96MT8 703 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 LRRC3Q9BY71 257 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 GSX2Q9BZM3 304 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 PPCSQ9HAB8 311 aa8.21□□□□□ -1.09
CLCN3-206ENST00000507875 NRDCO43847 1150 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 TAF5LO75529 589 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 RASGRP1O95267 797 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 CD2BP2O95400 341 aaKnown RBP8.21□□□□□ -1.1
CLCN3-206ENST00000507875 MCAMP43121 646 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 NNTQ13423 1086 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 LEO1Q8WVC0 666 aaPredicted RBP8.21□□□□□ -1.1
CLCN3-206ENST00000507875 HOOK2Q96ED9 719 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 FAM84BQ96KN1 310 aaPredicted RBP8.21□□□□□ -1.1
CLCN3-206ENST00000507875 DSCC1Q9BVC3 393 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 GRIP2Q9C0E4 1043 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 FAM86C1Q9NVL1 165 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 HMG20BQ9P0W2 317 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 ZFATQ9P243 1243 aa8.21□□□□□ -1.1
CLCN3-206ENST00000507875 DIS3Q9Y2L1 958 aaKnown RBP8.21□□□□□ -1.1
CLCN3-206ENST00000507875 LTBP3Q9NS15 1303 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 ZNF646O15015 1829 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-206ENST00000507875 CAND2O75155 1236 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 PHKA1P46020 1223 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 C1QTNF8P60827 252 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-206ENST00000507875 SLC10A6Q3KNW5 377 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 TMEM67Q5HYA8 995 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 ADAMTSL4Q6UY14 1074 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 CHPFQ8IZ52 775 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 WDR66Q8TBY9 1149 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 ZIC5Q96T25 663 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 ZMYM6O95789 1325 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 CCDC171Q6TFL3 1326 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 FER1L6Q2WGJ9 1857 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 CILPO75339 1184 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 ACRP10323 421 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 IL1R1P14778 569 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 CDC27P30260 824 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 HSPA4P34932 840 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 ADD2P35612 726 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 CCNFP41002 786 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 FKBP1AP62942 108 aaKnown RBP8.2□□□□□ -1.1
CLCN3-206ENST00000507875 BRD3Q15059 726 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 TDRD7Q8NHU6 1098 aaKnown RBP8.2□□□□□ -1.1
CLCN3-206ENST00000507875 MAP4K1Q92918 833 aa8.2□□□□□ -1.1
CLCN3-206ENST00000507875 LSG1Q9H089 658 aaKnown RBP8.2□□□□□ -1.1
CLCN3-206ENST00000507875 NCOA5Q9HCD5 579 aaKnown RBP8.2□□□□□ -1.1
CLCN3-206ENST00000507875 GPN3Q9UHW5 284 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-206ENST00000507875 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 EDN3P14138 238 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 GNAT2P19087 354 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 MCM2P49736 904 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 NT5C2P49902 561 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 GPSM2P81274 684 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 POU4F2Q12837 409 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 KRT32Q14532 448 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 ICE2Q659A1 982 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 CWC27Q6UX04 472 aaKnown RBP8.19□□□□□ -1.1
CLCN3-206ENST00000507875 LRRTM3Q86VH5 581 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 ZSWIM2Q8NEG5 633 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 TBC1D22AQ8WUA7 517 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 SPATA9Q9BWV2 254 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-206ENST00000507875 TM6SF1Q9BZW5 370 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 INO80BQ9C086 356 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-206ENST00000507875 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 MIR1-1HGQ9H1L0 117 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 MCM8Q9UJA3 840 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 DNAJA2O60884 412 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 HSP90AA1P07900 732 aaKnown RBP8.19□□□□□ -1.1
CLCN3-206ENST00000507875 LMNB1P20700 586 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 ZNF165P49910 485 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 PRICKLE2Q7Z3G6 844 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 TBC1D16Q8TBP0 767 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 GAL3ST3Q96A11 431 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 TAGLN3Q9UI15 199 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 CTNNA3Q9UI47 895 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 LAMB1P07942 1786 aa8.19□□□□□ -1.1
CLCN3-206ENST00000507875 FAM205AQ6ZU69 1335 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 MYH2Q9UKX2 1941 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 SNED1Q8TER0 1413 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ALG1L2C9J202 215 aa8.18□□□□□ -1.1
CLCN3-206ENST00000507875 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 598.6 ms