RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 FAAP100Q0VG06 881 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 FUT2Q10981 343 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 STK3Q13188 491 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 AP3B2Q13367 1082 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 TOB2Q14106 344 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-211ENST00000507689 CELF3Q5SZQ8 465 aaKnown RBP17.9■□□□□ 0.46
COL1A1-211ENST00000507689 TDHQ8IZJ6 230 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 BADQ92934 168 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 SLKQ9H2G2 1235 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-211ENST00000507689 NFRKBQ6P4R8 1299 aa17.89■□□□□ 0.45
COL1A1-211ENST00000507689 SH3RF1Q7Z6J0 888 aa17.89■□□□□ 0.45
COL1A1-211ENST00000507689 FAM126BQ8IXS8 530 aa17.89■□□□□ 0.45
COL1A1-211ENST00000507689 TMEM199Q8N511 208 aa17.89■□□□□ 0.45
COL1A1-211ENST00000507689 PHKBQ93100 1093 aa17.89■□□□□ 0.45
COL1A1-211ENST00000507689 ZFP91Q96JP5 570 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-211ENST00000507689 INPP4AQ96PE3 977 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-211ENST00000507689 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
COL1A1-211ENST00000507689 NCOA5Q9HCD5 579 aaKnown RBP17.89■□□□□ 0.45
COL1A1-211ENST00000507689 TRIM43BA6NCK2 446 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 SPATA31C2B4DYI2 1134 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 MAFGO15525 162 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 SORBS3O60504 671 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 TIMP1P01033 207 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 UBA1P22314 1058 aaKnown RBP17.88■□□□□ 0.45
COL1A1-211ENST00000507689 ICAM3P32942 547 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 MRPS9P82933 396 aaKnown RBP17.88■□□□□ 0.45
COL1A1-211ENST00000507689 FPGSQ05932 587 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 PTPN11Q06124 597 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-211ENST00000507689 MTMR1Q13613 665 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 NBPF20Q3BBV1 942 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 C7orf31Q8N865 590 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 SLC43A3Q8NBI5 491 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 TRIM43Q96BQ3 446 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-211ENST00000507689 GPRASP2Q96D09 838 aa17.88■□□□□ 0.45
COL1A1-211ENST00000507689 ESYT2A0FGR8 921 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 RGS20O76081 388 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 DEXIO95424 95 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 XBP1P17861 261 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 REXO1Q8N1G1 1221 aaKnown RBP17.87■□□□□ 0.45
COL1A1-211ENST00000507689 CCDC155Q8N6L0 562 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 SENP7Q9BQF6 1050 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
COL1A1-211ENST00000507689 ANO3Q9BYT9 981 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 ALDH8A1Q9H2A2 487 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-211ENST00000507689 HIPK3Q9H422 1215 aa17.87■□□□□ 0.45
COL1A1-211ENST00000507689 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 CEP290O15078 2479 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 NEK4P51957 841 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 NLRP5P59047 1200 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 PPIGQ13427 754 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL1A1-211ENST00000507689 METTL7BQ6UX53 244 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 CYFIP1Q7L576 1253 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 PPP1R12CQ9BZL4 782 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 PRO3102Q9H379 93 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 SH3GLB2Q9NR46 395 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
COL1A1-211ENST00000507689 B4GALT4O60513 344 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 CD4P01730 458 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 MFSD10Q14728 455 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 JAKMIP3Q5VZ66 844 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 MFSD5Q6N075 450 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 RETREG2Q8NC44 543 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 SDF4Q9BRK5 362 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 ALG1Q9BT22 464 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 ZMYND12Q9H0C1 365 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 TRPV6Q9H1D0 765 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 TCEAL9Q9UHQ7 104 aa17.85■□□□□ 0.45
COL1A1-211ENST00000507689 ZNF215Q9UL58 517 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-211ENST00000507689 GRIN2DO15399 1336 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 PPFIA3O75145 1194 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 ZNF286BP0CG31 522 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 PSEN2P49810 448 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 SP2Q02086 613 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 SP4Q02446 784 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 BFSP2Q13515 415 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 NTRK3Q16288 839 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 HSDL1Q3SXM5 330 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 FAM177A1Q8N128 213 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-211ENST00000507689 WASF1Q92558 559 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 MTIF3Q9H2K0 278 aaKnown RBP17.84■□□□□ 0.45
COL1A1-211ENST00000507689 JADE2Q9NQC1 790 aa17.84■□□□□ 0.45
COL1A1-211ENST00000507689 SREBF1P36956 1147 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 AK2P54819 239 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 PKN1Q16512 942 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 PTGISQ16647 500 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 KIAA0753Q2KHM9 967 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 CEP55Q53EZ4 464 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 PGBD1Q96JS3 809 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 MXRA8Q9BRK3 442 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 TRMT13Q9NUP7 481 aaKnown RBP17.83■□□□□ 0.44
COL1A1-211ENST00000507689 TMEM260Q9NX78 707 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 PKD2L1Q9P0L9 805 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 VPS54Q9P1Q0 977 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 UBIAD1Q9Y5Z9 338 aa17.83■□□□□ 0.44
COL1A1-211ENST00000507689 PFKFB2O60825 505 aa17.82■□□□□ 0.44
COL1A1-211ENST00000507689 F2P00734 622 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms